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Tag Content
UUCD2 ID IUUC-Sbi-114090
UUCD1 version UUC-SoB-01298
Ensembl Protein ID Sb04g002390.1
UniProt Accession C5XTS0; C5XTS0_SORBI
Genbank Protein ID EES04443.1
Protein Name E3 ubiquitin-protein ligase
Genbank Nucleotide ID CM000763
Gene Name SORBI_004G027000
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb04g002390 Sb04g002390.1 Sb04g002390.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 37.11 6.00e-41 165.00 IUUC-Hsa-046357
E3 activity/RING/RING 37.11 4.00e-41 166.00 IUUC-Mmu-064129
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Sorghum bicolor
Functional Description
(View)

Functional Description


     E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.
 E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.
Protein Sequence
(Fasta)
MAPGSSIVTV VPESDCGDDD GLSEALGGIR LDVDSASKPW STSLANVALS SLSGLNDLLE 60
CPVCTNSMRP PILQCPNGHT ICSSCKHRVE NHCPTCRQEL GNIRCLALEK VAEQLQLPCK 120
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Protein Fasta Sequence


>IUUC-Sbi-114090|E3,RING|Sorghum bicolor
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Nucleotide Sequence
(Fasta)
CCCCTCGGCG GCGTCCAGCG ACGGAGGGGC AGTCCCAGGC TCGGCGGCGG CGGCGGCGGC 60
TCCTCCTCCC GCCTCTCGCC AGTCGCCTCG CGCCCTCGCC TCCGTCCTCC GCGCACCGGC 120
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Nucleotide Fasta Sequence


>IUUC-Sbi-114090|E3,RING|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR018121--7-in-absentia-prot_TRAF-dom
IPR004162--SINA-like
IPR008974--TRAF-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR013010--Znf_SIAH
PROSITE

PS50089--ZF_RING_2
PS51081--ZF_SIAH
Pfam

PF03145--Sina
Gene Ontology

GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0007275--P:multicellular organism development
GO:0006511--P:ubiquitin-dependent protein catabolic process
KEGG sbi:SORBI_04g002390
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000061 Aegilops tauschii 89.74 2.00e-167 580.00
IUUC-Aml-001186 Ailuropoda melanoleuca 37.11 1.00e-42 165.00
IUUC-Apl-003813 Anas platyrhynchos 37.11 1.00e-42 165.00
IUUC-Aca-005014 Anolis carolinensis 37.11 2.00e-42 165.00
IUUC-Ate-010296 Aspergillus terreus 29.06 1.00e-05 43.90
IUUC-Ame-011196 Astyanax mexicanus 37.50 2.00e-43 168.00
IUUC-Bta-012887 Bos taurus 37.11 1.00e-42 165.00
IUUC-Bdi-014200 Brachypodium distachyon 89.03 3.00e-165 573.00
IUUC-Cja-019796 Callithrix jacchus 37.11 2.00e-42 165.00
IUUC-Cfa-020642 Canis familiaris 37.11 1.00e-42 166.00
IUUC-Cpo-022348 Cavia porcellus 37.11 1.00e-42 165.00
IUUC-Csa-023974 Chlorocebus sabaeus 37.11 2.00e-42 165.00
IUUC-Cho-024933 Choloepus hoffmanni 35.32 1.00e-38 152.00
IUUC-Dre-028041 Danio rerio 37.50 2.00e-43 169.00
IUUC-Dno-029764 Dasypus novemcinctus 37.11 2.00e-42 165.00
IUUC-Dor-030489 Dipodomys ordii 30.27 3.00e-19 87.00
IUUC-Ete-032423 Echinops telfairi 38.84 2.00e-41 161.00
IUUC-Eca-033536 Equus caballus 37.11 1.00e-42 165.00
IUUC-Eeu-035314 Erinaceus europaeus 38.84 2.00e-41 162.00
IUUC-Fca-035362 Felis catus 37.11 1.00e-42 166.00
IUUC-Fal-037487 Ficedula albicollis 37.11 1.00e-42 166.00
IUUC-Gmo-039091 Gadus morhua 36.22 5.00e-38 150.00
IUUC-Gga-040269 Gallus gallus 37.11 1.00e-42 165.00
IUUC-Gac-042282 Gasterosteus aculeatus 37.50 2.00e-43 168.00
IUUC-Ggo-045444 Gorilla gorilla 37.11 2.00e-42 165.00
IUUC-Hsa-046357 Homo sapiens 37.11 2.00e-42 165.00
IUUC-Hvu-047574 Hordeum vulgare 88.78 4.00e-166 576.00
IUUC-Itr-048046 Ictidomys tridecemlineatus 37.11 1.00e-42 165.00
IUUC-Lch-049504 Latimeria chalumnae 37.11 1.00e-42 165.00
IUUC-Lpe-050879 Leersia perrieri 89.32 3.00e-161 560.00
IUUC-Loc-052191 Lepisosteus oculatus 37.11 2.00e-42 165.00
IUUC-Laf-053668 Loxodonta africana 37.11 1.00e-42 165.00
IUUC-Mcc-054640 Macaca mulatta 37.11 2.00e-42 165.00
IUUC-Meu-055922 Macropus eugenii 34.92 2.00e-37 148.00
IUUC-Mga-059503 Meleagris gallopavo 37.11 2.00e-42 165.00
IUUC-Mmr-060794 Microcebus murinus 37.11 1.00e-42 165.00
IUUC-Mdo-061971 Monodelphis domestica 35.71 6.00e-39 153.00
IUUC-Mmu-064129 Mus musculus 37.11 1.00e-42 166.00
IUUC-Mpu-066488 Mustela putorius furo 37.11 1.00e-42 165.00
IUUC-Mlu-067207 Myotis lucifugus 37.11 1.00e-42 166.00
IUUC-Nle-069706 Nomascus leucogenys 37.11 2.00e-42 165.00
IUUC-Ont-071849 Oreochromis niloticus 37.50 2.00e-43 168.00
IUUC-Ocu-074876 Oryctolagus cuniculus 37.11 2.00e-42 165.00
IUUC-Oba-075454 Oryza barthii 90.29 5.00e-161 558.00
IUUC-Ogl-077712 Oryza glaberrima 90.29 5.00e-161 558.00
IUUC-Ogu-078910 Oryza glumaepatula 90.29 6.00e-161 559.00
IUUC-Oin-079749 Oryza indica 90.29 5.00e-161 558.00
IUUC-Ome-081318 Oryza meridionalis 90.61 2.00e-161 560.00
IUUC-Oni-083109 Oryza nivara 90.29 5.00e-161 558.00
IUUC-Opu-084065 Oryza punctata 90.29 3.00e-161 560.00
IUUC-Oru-084785 Oryza rufipogon 90.29 5.00e-161 558.00
IUUC-Osa-085610 Oryza sativa 90.29 5.00e-161 558.00
IUUC-Ola-086814 Oryzias latipes 37.50 2.00e-43 168.00
IUUC-Oga-088399 Otolemur garnettii 37.11 1.00e-42 165.00
IUUC-Oar-089323 Ovis aries 37.11 2.00e-42 165.00
IUUC-Ptr-090692 Pan troglodytes 37.11 2.00e-42 165.00
IUUC-Pan-092012 Papio anubis 37.11 2.00e-42 165.00
IUUC-Psi-093687 Pelodiscus sinensis 37.11 1.00e-42 165.00
IUUC-Pma-094387 Petromyzon marinus 37.74 8.00e-44 169.00
IUUC-Pfo-097134 Poecilia formosa 37.50 2.00e-43 168.00
IUUC-Pab-097555 Pongo abelii 37.11 2.00e-42 165.00
IUUC-Pca-100328 Procavia capensis 34.13 1.00e-35 142.00
IUUC-Rno-104866 Rattus norvegicus 37.11 1.00e-42 166.00
IUUC-Sha-106547 Sarcophilus harrisii 37.11 2.00e-42 165.00
IUUC-Sit-110595 Setaria italica 97.11 0.00e+00 632.00
IUUC-Ssc-116441 Sus scrofa 35.32 1.00e-38 152.00
IUUC-Tgu-116579 Taeniopygia guttata 37.11 1.00e-42 165.00
IUUC-Tru-118250 Takifugu rubripes 36.72 2.00e-41 161.00
IUUC-Tni-120488 Tetraodon nigroviridis 37.50 4.00e-40 157.00
IUUC-Tae-123647 Triticum aestivum 89.74 2.00e-167 580.00
IUUC-Ttr-129166 Tursiops truncatus 37.76 3.00e-39 154.00
IUUC-Xtr-132553 Xenopus tropicalis 37.11 1.00e-42 166.00
IUUC-Xma-133670 Xiphophorus maculatus 37.50 2.00e-43 168.00
Created Date 25-Jun-2017

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