iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007095

UUCD1 version

UUC-ArT-00958

Ensembl Protein ID

AT5G15820.1

UniProt Accession

Q9LFU4; Q9LFU4_ARATH

Genbank Protein ID

AAL15297.1; AAM47324.1; AED92211.1; CAC01781.1

Protein Name

AT5g15820/F14F8_200; Putative uncharacterized protein F14F8_200; RING/U-box superfamily protein

Genbank Nucleotide ID

AY057666; AY113016; CP002688; AL391144

Gene Name

At5g15820; F14F8.200; F14F8_200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G15820	AT5G15820.1	AT5G15820.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.50e-07	30.9	291	332

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+++   k+ ++ lpC+H +h +C+  w         + +CP+Cr
   Q: 291  CAICKDEVvfKEKVKRLPCKHYYHGECIIPW------LGIRNTCPVCR 332
           ******887766699****************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSSAKLFGCS INVNVEAEEE EGGDGGSSTN VEVSRSGNQP DCEAMSFSNQ MEIGVRNTYY 60
QFLESNSDSG SDSMYAEPEF IDFFDRESYE VDTVREVCVS SNQRVSTPGY FNIWDQDVDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGAATCTTT TAACCTTGTC AAATTTTGTT TTTCTTTTCT CTCTGAACCC GAAAACTCCA 60
GCAATGTCGT CGGCGAAACT TTTCGGTTGT TCTATTAACG TTAACGTTGA GGCAGAGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G15820

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005840	Arabidopsis lyrata	64.31	4.00e-106	377.00
IUUC-Bol-015586	Brassica oleracea	41.57	1.00e-47	182.00
IUUC-Lpe-051346	Leersia perrieri	44.36	1.00e-22	99.40
IUUC-Sbi-114040	Sorghum bicolor	59.76	2.00e-26	112.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence