iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114484

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G106700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g008710	Sb04g008710.1	Sb04g008710.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.80e-32	108.7	195	229

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtg 33
           H  +v +l++   d  +l+++s D++i+vWD+r  
   Q: 195  HDHEVLSLDWdkYDpSILATASVDKSIRVWDVRAP 229
           9999******99555899*************9876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPAFKAPAPG FAVRFSPFHE NRLLAATSQH FGLVGNGHLI VLDLAAAGPG PGAAPVPVFS 60
FPTSDALFDC AWSESHDSLC AAASGDGSVR LFDAALPPAQ NPVRLLREHA REVHGLDWNP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAGAAAT TAAAAAGGAA AAAATAAATT AAAATCCAAG TCTTACCCGA GTCCCCTTCC 60
CGATCCGCCG GCCGATCCAC CCACCGCCGC CATGCCGGCG TTCAAGGCCC CGGCGCCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005622--C:intracellular
GO:0006625--P:protein targeting to peroxisome

KEGG

sbi:SORBI_04g008710

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001966	Ailuropoda melanoleuca	43.28	3.00e-73	267.00
IUUC-Atr-003127	Amborella trichopoda	61.56	6.00e-118	416.00
IUUC-Apl-004050	Anas platyrhynchos	43.66	1.00e-67	248.00
IUUC-Aca-004489	Anolis carolinensis	43.77	2.00e-74	271.00
IUUC-Aly-006031	Arabidopsis lyrata	62.50	1.00e-123	435.00
IUUC-Ath-007361	Arabidopsis thaliana	62.81	1.00e-123	435.00
IUUC-Ago-007708	Ashbya gossypii	37.02	6.00e-58	216.00
IUUC-Acl-008039	Aspergillus clavatus	40.80	7.00e-64	236.00
IUUC-Afl-008394	Aspergillus flavus	40.35	2.00e-65	242.00
IUUC-Afu-008754	Aspergillus fumigatus	41.03	5.00e-65	240.00
IUUC-Ani-009421	Aspergillus nidulans	41.21	2.00e-64	238.00
IUUC-Ang-009727	Aspergillus niger	45.13	4.00e-69	253.00
IUUC-Aor-010236	Aspergillus oryzae	40.35	2.00e-65	242.00
IUUC-Ate-010324	Aspergillus terreus	41.79	4.00e-66	244.00
IUUC-Ame-011226	Astyanax mexicanus	42.99	4.00e-73	267.00
IUUC-Bgr-012081	Blumeria graminis	38.58	8.00e-58	216.00
IUUC-Bta-013366	Bos taurus	41.97	2.00e-72	265.00
IUUC-Bci-013909	Botrytis cinerea	39.34	1.00e-57	216.00
IUUC-Bdi-014172	Brachypodium distachyon	89.10	9.00e-166	575.00
IUUC-Bol-016034	Brassica oleracea	63.44	3.00e-125	440.00
IUUC-Bra-017284	Brassica rapa	63.44	2.00e-124	437.00
IUUC-Cja-019975	Callithrix jacchus	43.61	4.00e-72	263.00
IUUC-Cfa-020059	Canis familiaris	42.62	4.00e-73	266.00
IUUC-Cpo-021881	Cavia porcellus	42.30	4.00e-73	267.00
IUUC-Cre-022741	Chlamydomonas reinhardtii	54.90	1.00e-96	345.00
IUUC-Csa-024220	Chlorocebus sabaeus	44.88	6.00e-65	239.00
IUUC-Cho-024382	Choloepus hoffmanni	39.21	7.00e-56	209.00
IUUC-Cin-025606	Ciona intestinalis	34.55	2.00e-28	117.00
IUUC-Csv-026072	Ciona savignyi	40.00	4.00e-63	234.00
IUUC-Cne-027080	Cryptococcus neoformans	33.04	4.00e-51	194.00
IUUC-Dre-028830	Danio rerio	42.49	5.00e-73	266.00
IUUC-Dno-029570	Dasypus novemcinctus	43.42	2.00e-72	265.00
IUUC-Dor-030458	Dipodomys ordii	46.75	5.00e-39	154.00
IUUC-Dse-031399	Dothistroma septosporum	37.72	6.00e-58	216.00
IUUC-Dme-031641	Drosophila melanogaster	35.96	7.00e-49	186.00
IUUC-Ete-032339	Echinops telfairi	41.97	2.00e-71	261.00
IUUC-Eca-034154	Equus caballus	42.50	1.00e-65	241.00
IUUC-Eeu-034764	Erinaceus europaeus	39.67	2.00e-66	244.00
IUUC-Fca-036310	Felis catus	44.49	2.00e-65	241.00
IUUC-Fal-036714	Ficedula albicollis	44.49	4.00e-65	240.00
IUUC-Fox-037723	Fusarium oxysporum	36.45	2.00e-58	218.00
IUUC-Fso-038438	Fusarium solani	34.13	1.00e-46	179.00
IUUC-Gmo-038852	Gadus morhua	38.05	4.00e-48	184.00
IUUC-Ggr-040004	Gaeumannomyces graminis	37.57	6.00e-50	190.00
IUUC-Gga-040465	Gallus gallus	42.76	7.00e-73	266.00
IUUC-Gac-042212	Gasterosteus aculeatus	41.67	1.00e-60	225.00
IUUC-Gma-042686	Glycine max	62.81	2.00e-124	437.00
IUUC-Ggo-045510	Gorilla gorilla	40.98	2.00e-67	248.00
IUUC-Hsa-046391	Homo sapiens	43.93	2.00e-73	268.00
IUUC-Hvu-047261	Hordeum vulgare	87.54	1.00e-164	571.00
IUUC-Itr-048170	Ictidomys tridecemlineatus	45.51	4.00e-46	176.00
IUUC-Kpa-049116	Komagataella pastoris	34.78	7.00e-53	200.00
IUUC-Lch-050018	Latimeria chalumnae	38.19	3.00e-24	103.00
IUUC-Lpe-051285	Leersia perrieri	88.79	6.00e-166	575.00
IUUC-Loc-051817	Lepisosteus oculatus	46.53	8.00e-56	208.00
IUUC-Lma-053274	Leptosphaeria maculans	42.20	2.00e-60	225.00
IUUC-Laf-053781	Loxodonta africana	43.28	1.00e-73	269.00
IUUC-Mcc-054938	Macaca mulatta	43.28	3.00e-72	264.00
IUUC-Meu-056863	Macropus eugenii	39.37	4.00e-55	207.00
IUUC-Mor-057017	Magnaporthe oryzae	36.14	4.00e-53	201.00
IUUC-Mpo-057357	Magnaporthe poae	37.60	1.00e-42	166.00
IUUC-Mtr-058152	Medicago truncatula	62.50	4.00e-126	442.00
IUUC-Mga-059292	Meleagris gallopavo	43.01	1.00e-68	251.00
IUUC-Mvi-060494	Microbotryum violaceum	40.93	4.00e-66	244.00
IUUC-Mmr-060856	Microcebus murinus	42.30	2.00e-72	265.00
IUUC-Mdo-062810	Monodelphis domestica	44.41	4.00e-73	267.00
IUUC-Mmu-063693	Mus musculus	42.30	8.00e-73	266.00
IUUC-Mac-065170	Musa acuminata	70.62	4.00e-136	476.00
IUUC-Mpu-066229	Mustela putorius furo	42.62	4.00e-73	266.00
IUUC-Mlu-067861	Myotis lucifugus	44.19	5.00e-62	229.00
IUUC-Nfi-068268	Neosartorya fischeri	40.74	9.00e-65	239.00
IUUC-Ncr-068756	Neurospora crassa	36.46	1.00e-55	209.00
IUUC-Nle-070047	Nomascus leucogenys	42.62	8.00e-70	256.00
IUUC-Opr-070256	Ochotona princeps	43.78	1.00e-48	185.00
IUUC-Ont-071850	Oreochromis niloticus	42.04	1.00e-68	252.00
IUUC-Oan-073642	Ornithorhynchus anatinus	44.44	2.00e-55	207.00
IUUC-Ocu-074437	Oryctolagus cuniculus	43.61	2.00e-73	268.00
IUUC-Oba-075964	Oryza barthii	90.37	7.00e-168	582.00
IUUC-Obr-076872	Oryza brachyantha	90.97	2.00e-167	580.00
IUUC-Ogl-077459	Oryza glaberrima	90.37	5.00e-168	582.00
IUUC-Ogu-078461	Oryza glumaepatula	90.15	5.00e-170	589.00
IUUC-Oin-079865	Oryza indica	90.06	1.00e-167	581.00
IUUC-Olo-081022	Oryza longistaminata	92.90	5.00e-93	332.00
IUUC-Ome-081607	Oryza meridionalis	89.75	1.00e-167	581.00
IUUC-Oni-082386	Oryza nivara	90.06	1.00e-167	581.00
IUUC-Opu-083636	Oryza punctata	87.42	6.00e-165	572.00
IUUC-Oru-084504	Oryza rufipogon	88.58	1.00e-166	577.00
IUUC-Osa-086268	Oryza sativa	90.06	1.00e-167	581.00
IUUC-Ola-086475	Oryzias latipes	43.63	4.00e-71	260.00
IUUC-Olu-087686	Ostreococcus lucimarinus	49.67	6.00e-90	323.00
IUUC-Oga-088529	Otolemur garnettii	44.57	4.00e-63	233.00
IUUC-Oar-089862	Ovis aries	41.43	1.00e-64	238.00
IUUC-Ptr-090607	Pan troglodytes	43.61	6.00e-73	266.00
IUUC-Pan-092393	Papio anubis	42.81	2.00e-69	254.00
IUUC-Psi-093958	Pelodiscus sinensis	45.28	2.00e-66	244.00
IUUC-Pma-094611	Petromyzon marinus	44.15	3.00e-69	254.00
IUUC-Pno-094866	Phaeosphaeria nodorum	41.91	7.00e-60	223.00
IUUC-Ppa-095970	Physcomitrella patens	57.01	6.00e-113	399.00
IUUC-Pab-097924	Pongo abelii	43.61	7.00e-73	266.00
IUUC-Pop-100046	Populus trichocarpa	64.38	4.00e-126	443.00
IUUC-Pca-100754	Procavia capensis	36.18	3.00e-53	201.00
IUUC-Ppe-102047	Prunus persica	63.78	1.00e-124	438.00
IUUC-Pva-102614	Pteropus vampyrus	41.97	5.00e-72	263.00
IUUC-Pgr-103662	Puccinia graminis	39.20	6.00e-64	236.00
IUUC-Ptt-103891	Puccinia triticina	36.42	5.00e-55	206.00
IUUC-Pte-104317	Pyrenophora teres	40.87	2.00e-56	211.00
IUUC-Pyt-104463	Pyrenophora triticirepentis	40.46	7.00e-57	213.00
IUUC-Rno-105921	Rattus norvegicus	43.28	2.00e-73	268.00
IUUC-Sce-106373	Saccharomyces cerevisiae	34.78	8.00e-55	206.00
IUUC-Sha-106887	Sarcophilus harrisii	43.79	2.00e-71	261.00
IUUC-Sja-107795	Schizosaccharomyces japonicus	37.62	3.00e-55	207.00
IUUC-Spo-108216	Schizosaccharomyces pombe	30.60	3.00e-41	161.00
IUUC-Ssl-108661	Sclerotinia sclerotiorum	40.84	2.00e-58	218.00
IUUC-Smo-109680	Selaginella moellendorffii	57.63	2.00e-108	384.00
IUUC-Sit-110327	Setaria italica	93.77	4.00e-167	579.00
IUUC-Sly-111794	Solanum lycopersicum	63.12	1.00e-124	438.00
IUUC-Stu-112137	Solanum tuberosum	63.75	2.00e-125	441.00
IUUC-Sar-113164	Sorex araneus	41.45	1.00e-68	251.00
IUUC-Sre-114949	Sporisorium reilianum	38.18	3.00e-62	231.00
IUUC-Ssc-116090	Sus scrofa	43.55	5.00e-70	256.00
IUUC-Tgu-116617	Taeniopygia guttata	42.57	2.00e-71	261.00
IUUC-Tru-118094	Takifugu rubripes	36.31	9.00e-51	192.00
IUUC-Tsy-118792	Tarsius syrichta	42.95	1.00e-72	265.00
IUUC-Tni-120098	Tetraodon nigroviridis	27.20	8.00e-22	98.20
IUUC-Tca-121170	Theobroma cacao	60.94	2.00e-117	414.00
IUUC-Tre-122029	Trichoderma reesei	37.72	1.00e-59	222.00
IUUC-Tvi-122286	Trichoderma virens	38.32	4.00e-61	227.00
IUUC-Tae-124120	Triticum aestivum	88.16	2.00e-163	566.00
IUUC-Tme-127139	Tuber melanosporum	43.08	2.00e-65	241.00
IUUC-Tbe-127809	Tupaia belangeri	30.71	2.00e-34	138.00
IUUC-Ttr-128258	Tursiops truncatus	41.96	4.00e-66	243.00
IUUC-Uma-129560	Ustilago maydis	38.76	1.00e-61	229.00
IUUC-Vda-129997	Verticillium dahliae	37.61	2.00e-57	215.00
IUUC-Vpa-130088	Vicugna pacos	40.33	1.00e-65	242.00
IUUC-Vvi-131333	Vitis vinifera	65.31	4.00e-125	440.00
IUUC-Xtr-132344	Xenopus tropicalis	41.82	7.00e-32	129.00
IUUC-Xma-133170	Xiphophorus maculatus	44.93	4.00e-44	169.00
IUUC-Yli-134347	Yarrowia lipolytica	35.73	1.00e-55	209.00
IUUC-Zma-135332	Zea mays	97.20	3.00e-177	613.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence