iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114717

UUCD1 version

UUC-SoB-00802

Ensembl Protein ID

Sb04g008920.1

UniProt Accession

A0A194YNW6; A0A194YNW6_SORBI

Genbank Protein ID

KXG29918.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G109100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g008920	Sb04g008920.1	Sb04g008920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.20e-08	33.6	143	185

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl + ++g  ++ lp C H+fh++C+  w       + + +CP+Cr
   Q: 143  CAVCLGEVEKGemVKRLPgCLHMFHQQCIDLW------LRDHSTCPVCR 185
           ********88766666779*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDCFVRLFGL AIANAVCIGG TGLLINALVG RARKPHNTSD MAALSVFLVV WVSISACVYP 60
AFCGALFPWS ALGRLLCSPQ RGLAWLLRLP CRGREEGHAA MYVLAREPPV RGGARVVAVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTGCT TCGTCCGCTT GTTCGGGCTG GCCATCGCCA ACGCGGTGTG CATCGGCGGC 60
ACGGGCCTCC TCATCAACGC GCTCGTCGGG CGCGCGCGGA AGCCCCACAA CACGAGCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051703	Leersia perrieri	54.29	1.00e-40	158.00
IUUC-Oba-075385	Oryza barthii	53.69	1.00e-37	151.00
IUUC-Obr-076375	Oryza brachyantha	47.64	4.00e-32	129.00
IUUC-Ogl-077105	Oryza glaberrima	56.31	8.00e-40	155.00
IUUC-Oin-079048	Oryza indica	56.31	4.00e-41	160.00
IUUC-Ome-081203	Oryza meridionalis	47.78	4.00e-35	142.00
IUUC-Opu-083847	Oryza punctata	50.51	8.00e-45	172.00
IUUC-Osa-085933	Oryza sativa	47.26	2.00e-36	144.00
IUUC-Sit-109689	Setaria italica	66.82	5.00e-79	286.00
IUUC-Tae-123126	Triticum aestivum	51.92	8.00e-48	182.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence