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Tag Content
UUCD2 ID IUUC-Sbi-114766
UUCD1 version UUC-SoB-00819
Ensembl Protein ID Sb04g009270.1
UniProt Accession C5XZF5; C5XZF5_SORBI
Genbank Protein ID EES04863.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000763
Gene Name SORBI_004G113700
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb04g009270 Sb04g009270.1 Sb04g009270.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 43.46 3.00e-49 193.00 IUUC-Hsa-047000
E3 activity/RING/RING 83.01 7.00e-121 429.00 IUUC-Osa-086166
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Sorghum bicolor
Protein Sequence
(Fasta)
MADGGSGSGE PGAGGGSAPV CSFVRKPPKN MRKRPAAPAG SDDDDDGGGS GALAAARSKK 60
GPPSSAAGKL VFSTADASSE PRRFQYESSR TIQSTDSRAT AVLETETEFD RDSRAIREKQ 120
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Protein Fasta Sequence


>IUUC-Sbi-114766|E3,RING|Sorghum bicolor
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Nucleotide Sequence
(Fasta)
ATGGCCGACG GCGGCAGCGG CAGCGGCGAG CCGGGGGCCG GCGGTGGATC GGCGCCGGTG 60
TGCAGTTTCG TGAGGAAACC ACCCAAGAAC ATGCGGAAGC GCCCCGCCGC GCCCGCGGGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sbi-114766|E3,RING|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF00642--zf-CCCH
SMART

SM00184--RING
SM00356--ZnF_C3H1
Gene Ontology

GO:0005684--C:U2-type spliceosomal complex
GO:0008270--F:zinc ion binding
GO:0045292--P:mRNA cis splicing, via spliceosome
GO:0034247--P:snoRNA splicing
KEGG sbi:SORBI_04g009270
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000118 Aegilops tauschii 78.34 3.00e-127 447.00
IUUC-Aml-002002 Ailuropoda melanoleuca 43.27 1.00e-51 196.00
IUUC-Atr-003145 Amborella trichopoda 58.39 1.00e-87 315.00
IUUC-Apl-003440 Anas platyrhynchos 46.09 4.00e-51 194.00
IUUC-Aca-004421 Anolis carolinensis 38.99 2.00e-51 195.00
IUUC-Aly-006121 Arabidopsis lyrata 61.08 4.00e-101 360.00
IUUC-Ath-007493 Arabidopsis thaliana 61.49 2.00e-98 350.00
IUUC-Ago-007731 Ashbya gossypii 36.57 1.00e-25 108.00
IUUC-Acl-008186 Aspergillus clavatus 43.48 4.00e-37 147.00
IUUC-Afl-008484 Aspergillus flavus 41.45 2.00e-33 135.00
IUUC-Afu-008971 Aspergillus fumigatus 44.72 1.00e-37 149.00
IUUC-Ani-009499 Aspergillus nidulans 46.36 2.00e-37 149.00
IUUC-Ang-009717 Aspergillus niger 46.21 4.00e-39 154.00
IUUC-Aor-009898 Aspergillus oryzae 41.45 2.00e-33 135.00
IUUC-Ate-010508 Aspergillus terreus 40.44 1.00e-36 146.00
IUUC-Ame-011925 Astyanax mexicanus 45.23 2.00e-52 198.00
IUUC-Bgr-012259 Blumeria graminis 31.85 2.00e-34 139.00
IUUC-Bta-012958 Bos taurus 43.62 2.00e-50 191.00
IUUC-Bci-013882 Botrytis cinerea 45.03 2.00e-36 145.00
IUUC-Bdi-014084 Brachypodium distachyon 83.01 1.00e-128 451.00
IUUC-Bol-016607 Brassica oleracea 60.62 3.00e-99 354.00
IUUC-Bra-017747 Brassica rapa 60.62 2.00e-100 358.00
IUUC-Cel-018698 Caenorhabditis elegans 40.89 1.00e-41 162.00
IUUC-Cja-019434 Callithrix jacchus 44.49 1.00e-51 196.00
IUUC-Cfa-020902 Canis familiaris 43.27 1.00e-51 196.00
IUUC-Cre-022885 Chlamydomonas reinhardtii 51.35 3.00e-70 257.00
IUUC-Csa-023933 Chlorocebus sabaeus 42.23 2.00e-49 188.00
IUUC-Cho-024587 Choloepus hoffmanni 40.64 1.00e-31 129.00
IUUC-Cin-025328 Ciona intestinalis 42.80 1.00e-53 202.00
IUUC-Csv-026148 Ciona savignyi 45.60 4.00e-55 207.00
IUUC-Cgl-026700 Colletotrichum gloeosporioides 45.04 1.00e-31 129.00
IUUC-Cne-026816 Cryptococcus neoformans 51.03 3.00e-40 157.00
IUUC-Dre-027744 Danio rerio 45.64 3.00e-54 204.00
IUUC-Dse-031155 Dothistroma septosporum 45.14 2.00e-33 135.00
IUUC-Dme-031788 Drosophila melanogaster 48.03 1.00e-57 215.00
IUUC-Ete-033013 Echinops telfairi 43.64 1.00e-50 192.00
IUUC-Eca-033460 Equus caballus 43.27 1.00e-51 196.00
IUUC-Fca-035525 Felis catus 42.64 6.00e-52 196.00
IUUC-Fal-037206 Ficedula albicollis 45.15 3.00e-52 197.00
IUUC-Fox-037959 Fusarium oxysporum 42.67 4.00e-35 140.00
IUUC-Fso-038348 Fusarium solani 32.48 9.00e-36 143.00
IUUC-Gmo-038718 Gadus morhua 45.78 1.00e-53 202.00
IUUC-Ggr-040114 Gaeumannomyces graminis 43.40 5.00e-37 147.00
IUUC-Gga-041037 Gallus gallus 44.00 3.00e-53 201.00
IUUC-Gac-042103 Gasterosteus aculeatus 44.21 5.00e-53 200.00
IUUC-Gma-043581 Glycine max 62.19 9.00e-100 355.00
IUUC-Ggo-044906 Gorilla gorilla 44.30 3.00e-51 194.00
IUUC-Hsa-047000 Homo sapiens 44.30 3.00e-51 194.00
IUUC-Hvu-047578 Hordeum vulgare 87.29 2.00e-49 186.00
IUUC-Itr-048102 Ictidomys tridecemlineatus 42.38 1.00e-51 196.00
IUUC-Kpa-049320 Komagataella pastoris 38.24 1.00e-32 132.00
IUUC-Lch-050488 Latimeria chalumnae 45.08 2.00e-54 204.00
IUUC-Lpe-051156 Leersia perrieri 83.44 5.00e-115 406.00
IUUC-Loc-052670 Lepisosteus oculatus 44.07 8.00e-53 199.00
IUUC-Lma-053326 Leptosphaeria maculans 41.77 2.00e-36 145.00
IUUC-Laf-053570 Loxodonta africana 41.24 3.00e-52 197.00
IUUC-Mcc-055375 Macaca mulatta 44.30 4.00e-51 194.00
IUUC-Meu-056191 Macropus eugenii 45.57 6.00e-51 193.00
IUUC-Mor-057193 Magnaporthe oryzae 43.04 3.00e-36 144.00
IUUC-Mpo-057603 Magnaporthe poae 47.13 7.00e-38 150.00
IUUC-Mtr-058182 Medicago truncatula 61.56 1.00e-101 362.00
IUUC-Mla-058921 Melampsora laricipopulina 42.47 1.00e-30 124.00
IUUC-Mga-059281 Meleagris gallopavo 44.28 3.00e-53 201.00
IUUC-Mvi-060317 Microbotryum violaceum 44.72 8.00e-34 137.00
IUUC-Mmr-061744 Microcebus murinus 43.88 4.00e-51 194.00
IUUC-Mmu-064400 Mus musculus 43.27 4.00e-52 197.00
IUUC-Mac-065265 Musa acuminata 74.69 9.00e-91 325.00
IUUC-Mpu-066867 Mustela putorius furo 42.86 3.00e-51 194.00
IUUC-Mlu-067828 Myotis lucifugus 42.80 5.00e-52 197.00
IUUC-Nfi-068575 Neosartorya fischeri 42.86 4.00e-34 137.00
IUUC-Ncr-068828 Neurospora crassa 44.74 1.00e-33 136.00
IUUC-Nle-069137 Nomascus leucogenys 44.30 3.00e-51 194.00
IUUC-Ont-071497 Oreochromis niloticus 44.40 4.00e-52 197.00
IUUC-Oan-073182 Ornithorhynchus anatinus 42.86 4.00e-51 194.00
IUUC-Ocu-073949 Oryctolagus cuniculus 43.88 4.00e-51 194.00
IUUC-Oba-075693 Oryza barthii 82.75 4.00e-119 420.00
IUUC-Obr-076128 Oryza brachyantha 81.50 2.00e-112 398.00
IUUC-Ogl-077323 Oryza glaberrima 82.75 4.00e-119 420.00
IUUC-Ogu-078766 Oryza glumaepatula 82.75 4.00e-119 420.00
IUUC-Oin-080054 Oryza indica 82.75 4.00e-119 420.00
IUUC-Olo-080325 Oryza longistaminata 77.18 1.00e-88 318.00
IUUC-Ome-081331 Oryza meridionalis 81.90 3.00e-124 437.00
IUUC-Oni-082786 Oryza nivara 82.43 9.00e-120 422.00
IUUC-Opu-083855 Oryza punctata 82.64 3.00e-115 407.00
IUUC-Oru-084304 Oryza rufipogon 82.75 4.00e-119 420.00
IUUC-Osa-086166 Oryza sativa 82.43 3.00e-119 420.00
IUUC-Ola-086368 Oryzias latipes 43.20 9.00e-47 179.00
IUUC-Olu-087624 Ostreococcus lucimarinus 47.35 3.00e-56 210.00
IUUC-Oga-088080 Otolemur garnettii 43.25 1.00e-51 196.00
IUUC-Oar-089545 Ovis aries 43.85 8.00e-52 196.00
IUUC-Ptr-090827 Pan troglodytes 44.30 3.00e-51 194.00
IUUC-Pan-092245 Papio anubis 44.30 4.00e-51 194.00
IUUC-Psi-093790 Pelodiscus sinensis 45.64 1.00e-52 199.00
IUUC-Pma-094326 Petromyzon marinus 45.56 1.00e-54 206.00
IUUC-Pno-095057 Phaeosphaeria nodorum 44.03 4.00e-38 150.00
IUUC-Ppa-095690 Physcomitrella patens 63.74 1.00e-92 332.00
IUUC-Pfo-097026 Poecilia formosa 44.63 4.00e-53 200.00
IUUC-Pab-098689 Pongo abelii 44.30 3.00e-51 194.00
IUUC-Pca-100687 Procavia capensis 42.32 4.00e-49 187.00
IUUC-Ppe-101155 Prunus persica 69.81 2.00e-100 357.00
IUUC-Pgr-103440 Puccinia graminis 49.36 5.00e-41 160.00
IUUC-Ptt-103893 Puccinia triticina 62.96 3.00e-17 81.30
IUUC-Pte-104377 Pyrenophora teres 45.27 4.00e-39 154.00
IUUC-Pyt-104731 Pyrenophora triticirepentis 45.27 4.00e-39 154.00
IUUC-Rno-105967 Rattus norvegicus 42.86 1.00e-51 196.00
IUUC-Sce-106215 Saccharomyces cerevisiae 39.74 1.00e-31 129.00
IUUC-Sha-107587 Sarcophilus harrisii 44.44 4.00e-51 194.00
IUUC-Sja-107955 Schizosaccharomyces japonicus 43.96 2.00e-37 149.00
IUUC-Spo-108336 Schizosaccharomyces pombe 38.99 4.00e-33 135.00
IUUC-Smo-108930 Selaginella moellendorffii 58.04 4.00e-83 300.00
IUUC-Sit-110234 Setaria italica 85.24 9.00e-126 442.00
IUUC-Sly-111790 Solanum lycopersicum 75.14 1.00e-78 284.00
IUUC-Stu-111994 Solanum tuberosum 61.88 2.00e-103 367.00
IUUC-Sar-113374 Sorex araneus 42.86 3.00e-51 194.00
IUUC-Sre-115021 Sporisorium reilianum 48.62 5.00e-46 177.00
IUUC-Ssc-115474 Sus scrofa 43.67 1.00e-51 195.00
IUUC-Tgu-116649 Taeniopygia guttata 44.81 5.00e-52 197.00
IUUC-Tru-117701 Takifugu rubripes 44.08 5.00e-53 200.00
IUUC-Tni-120607 Tetraodon nigroviridis 43.98 6.00e-51 193.00
IUUC-Tca-121278 Theobroma cacao 62.15 3.00e-87 314.00
IUUC-Tre-122006 Trichoderma reesei 39.47 2.00e-29 122.00
IUUC-Tvi-122670 Trichoderma virens 40.67 1.00e-33 136.00
IUUC-Tae-122716 Triticum aestivum 78.34 1.00e-126 445.00
IUUC-Tur-126208 Triticum urartu 83.66 1.00e-115 408.00
IUUC-Tme-126908 Tuber melanosporum 43.27 3.00e-33 134.00
IUUC-Tbe-127394 Tupaia belangeri 44.30 3.00e-51 194.00
IUUC-Uma-129339 Ustilago maydis 43.55 2.00e-44 172.00
IUUC-Vda-129895 Verticillium dahliae 35.05 2.00e-39 155.00
IUUC-Vpa-130519 Vicugna pacos 44.73 3.00e-51 194.00
IUUC-Vvi-131382 Vitis vinifera 62.62 9.00e-97 345.00
IUUC-Xtr-131923 Xenopus tropicalis 43.63 8.00e-54 202.00
IUUC-Xma-133705 Xiphophorus maculatus 44.63 1.00e-53 202.00
IUUC-Yli-134518 Yarrowia lipolytica 49.26 4.00e-33 133.00
IUUC-Zma-135029 Zea mays 84.92 1.00e-115 408.00
Created Date 25-Jun-2017

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