iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000694

Ensembl Protein ID

EMT22800

UniProt Accession

M8BD40; M8BD40_AEGTA

Genbank Protein ID

EMT22800.1

Protein Name

Putative RING-H2 finger protein ATL4C

Genbank Nucleotide ID

KD521463

Gene Name

F775_21972

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_21972	EMT22800	EMT22800

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-08	35.4	46	88

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f   +d +++lp C H+fh dC+  w        ++ +CPlCr
   Q: 46   CAVCLTEFedaDD-LRLLPhCSHAFHPDCIDPW------LETRTTCPLCR 88
           ********77455.*******************......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MALHVAPPRR MTHQVRSFSF ASSVVVGLWR WGEIKEHKIG SGALECAVCL TEFEDADDLR 60
LLPHCSHAFH PDCIDPWLET RTTCPLCRAN LEKPPPPAAA PAPSSPPHAV VAMPVQQDEP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCACTAC ATGTCGCACC TCCTCGTCGT ATGACGCACC AGGTGCGTAG TTTCTCCTTT 60
GCCAGTTCAG TGGTTGTGGG CTTGTGGCGA TGGGGGTGCG CGCGCACCTC CTCGTCGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ats:F775_21972

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005783	Arabidopsis lyrata	33.60	4.00e-26	111.00
IUUC-Bdi-014837	Brachypodium distachyon	84.13	4.00e-29	121.00
IUUC-Lpe-051027	Leersia perrieri	49.37	2.00e-32	132.00
IUUC-Lma-053286	Leptosphaeria maculans	57.14	2.00e-12	66.60
IUUC-Oba-075308	Oryza barthii	53.81	2.00e-33	135.00
IUUC-Obr-076367	Oryza brachyantha	57.32	2.00e-39	155.00
IUUC-Ogl-077034	Oryza glaberrima	77.42	2.00e-24	105.00
IUUC-Ogu-078359	Oryza glumaepatula	48.21	4.00e-29	121.00
IUUC-Oin-079218	Oryza indica	53.50	8.00e-33	133.00
IUUC-Ome-081245	Oryza meridionalis	52.72	9.00e-33	133.00
IUUC-Oni-082249	Oryza nivara	77.42	1.00e-24	106.00
IUUC-Opu-083993	Oryza punctata	78.69	1.00e-24	106.00
IUUC-Oru-084953	Oryza rufipogon	77.42	1.00e-24	106.00
IUUC-Osa-085314	Oryza sativa	53.28	1.00e-32	133.00
IUUC-Sit-109945	Setaria italica	42.52	6.00e-27	114.00
IUUC-Sbi-114658	Sorghum bicolor	35.91	2.00e-30	126.00
IUUC-Tae-125061	Triticum aestivum	85.96	7.00e-65	239.00
IUUC-Tur-126779	Triticum urartu	76.36	4.00e-46	177.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence