iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-050848

Ensembl Protein ID

LPERR02G19740.1

UniProt Accession

A0A0D9VID2; A0A0D9VID2_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR02G19740	LPERR02G19740.1	LPERR02G19740.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-09	38.4	1331	1355

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 11   f.....sd.tllvsGsdDgtikvWD 29
           f      d +++++Gs+ +t +v++
   Q: 1331 FsccanKDgGYFATGSYSNTFRVFS 1355
           3444565669************986 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MSMAVASLRL LARGRHRVRL PAPLSAPGCR AAFLSGAAEE VPQADAPPPP PTPGRKVLES 60
FREEFEIGGR VISFETGKMA RFANGSVVIS MDDTHVLSTV AAAKSSEPVR DFLPLTVDYQ 120

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Nucleotide Sequence
(Fasta)

ATGTCGATGG CGGTGGCCTC CCTCCGGCTC CTGGCGCGCG GCCGCCACCG CGTCCGCCTC 60
CCCGCGCCGC TCTCCGCCCC GGGATGCCGC GCCGCGTTCC TCTCCGGCGC GGCCGAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001247--ExoRNase_PH_dom1
IPR015847--ExoRNase_PH_dom2
IPR012340--NA-bd_OB-fold
IPR012162--PNPase
IPR027408--PNPase/RNase_PH_dom
IPR015848--PNPase_PH_RNA-bd_bac/org-type
IPR000009--PP2A_PR55
IPR020568--Ribosomal_S5_D2-typ_fold
IPR022967--S1_dom
IPR003029--S1_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50126--S1

Pfam

PF03726--PNPase
PF01138--RNase_PH
PF03725--RNase_PH_C
PF00575--S1

PRINTS

PR00600--PP2APR55

SMART

SM00316--S1
SM00320--WD40

Gene Ontology

GO:0000159--C:protein phosphatase type 2A complex
GO:0000175--F:3'-5'-exoribonuclease activity
GO:0004654--F:polyribonucleotide nucleotidyltransferase activity
GO:0019888--F:protein phosphatase regulator activity
GO:0003723--F:RNA binding
GO:0006402--P:mRNA catabolic process
GO:0006396--P:RNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ogu-078234	Oryza glumaepatula	82.27	0.00e+00	692.00
IUUC-Ome-081634	Oryza meridionalis	85.38	0.00e+00	714.00
IUUC-Opu-083342	Oryza punctata	80.63	0.00e+00	680.00
IUUC-Sit-109823	Setaria italica	68.48	6.00e-157	546.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence