iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113892

Ensembl Protein ID

Sb04g026100.1

UniProt Accession

A0A194YQX8; A0A194YQX8_SORBI

Genbank Protein ID

KXG30638.1

Protein Name

Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G215800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g026100	Sb04g026100.1	Sb04g026100.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-10	40.5	149	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf...sd.tllvsGsdDgtikvWDlrtg 33
           ++  +++   ++  ll  +++D t+k+W ++++
   Q: 149  KIKRVRWcarPNsSLLMLAANDRTVKLWKVSEH 181
           57778999996668999999*********9766 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPMRRRSTRS VAPSPTTSPS PSGRREPQPP SRLLPQWKFS QVLGELPPAA ADAHRDGAPR 60
PQDDDADEIS AIEFDGRGEY LAAGDNAGRV ILFRRTDDGD GALLRSRAEL ERADRAGGAP 120

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Nucleotide Sequence
(Fasta)

ATGCCGATGA GGCGGAGGAG CACGAGGTCC GTCGCCCCTT CGCCGACCAC CTCTCCGTCG 60
CCGTCTGGCC GCCGAGAACC GCAGCCCCCG TCCCGGCTTC TTCCCCAGTG GAAGTTTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR000009--PP2A_PR55
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PRINTS

PR00600--PP2APR55

SMART

SM00320--WD40

Gene Ontology

GO:0000159--C:protein phosphatase type 2A complex
GO:0019888--F:protein phosphatase regulator activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-050848	Leersia perrieri	64.99	3.00e-159	555.00
IUUC-Ogu-078234	Oryza glumaepatula	61.88	5.00e-176	610.00
IUUC-Ome-081634	Oryza meridionalis	64.58	7.00e-157	546.00
IUUC-Opu-083342	Oryza punctata	62.89	1.00e-169	588.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence