iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017166

Ensembl Protein ID

Bra004280.1-P

UniProt Accession

M4CJ96; M4CJ96_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra004280	Bra004280.1	Bra004280.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.50e-10	40.6	288	329

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++dg  +++lpC+H+fh +C++kw       + +++CPlC+
   Q: 288  CCICLSSYEDGteLVTLPCNHHFHSTCIEKW------LKMNATCPLCK 329
           ********77766899***************......**********7 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSDSSSPLLR SRQSPRRRQP VIAVLLNRAT RRRGPSMVVR ETAAQELEER RADWGYSKPV 60
VALDMLWNAA FVVVAAVMLL VYKEEKPNVP VRVWICGYAV QCLVHVVLVW LEFRKRNASR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCGATT CCTCCTCCCC GCTTCTCCGC TCCCGTCAAT CTCCCCGACG CCGCCAGCCC 60
GTAATCGCGG TTCTGTTAAA CCGAGCTACG CGTCGGCGAG GACCATCGAT GGTCGTGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014419	Brachypodium distachyon	58.90	4.00e-67	248.00
IUUC-Bol-015102	Brassica oleracea	95.92	3.00e-152	530.00
IUUC-Sit-110199	Setaria italica	60.26	3.00e-84	304.00
IUUC-Sbi-114428	Sorghum bicolor	60.59	5.00e-84	304.00
IUUC-Tae-125157	Triticum aestivum	59.87	2.00e-73	268.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence