iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114425

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G251100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g029060	Sb04g029060.1	Sb04g029060.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-08	35.7	81	123

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle f   ++  +vlp C H fha+C+ +w       +k+ +CP+Cr
   Q: 81   CAVCLEAFqagDR-CRVLPrCEHGFHAQCVDQW------LRKSRLCPVCR 123
           ********88655.889999*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MVELTVSVLL LVAGVVAMLV LHVLIVVWAL RRGVVLRAAA SRRQDEERAA GQGLSPEDLN 60
ELPCHDHECS KAGAGAAGAE CAVCLEAFQA GDRCRVLPRC EHGFHAQCVD QWLRKSRLCP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGGAAC TGACGGTGTC CGTGCTCCTC CTGGTCGCCG GCGTCGTGGC GATGCTGGTG 60
CTCCACGTCC TCATCGTCGT CTGGGCGCTC AGGCGGGGCG TCGTCCTCCG CGCCGCGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g029060

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000931	Aegilops tauschii	54.17	5.00e-25	105.00
IUUC-Atr-002642	Amborella trichopoda	39.53	1.00e-24	104.00
IUUC-Hvu-047516	Hordeum vulgare	62.20	2.00e-33	134.00
IUUC-Lpe-050839	Leersia perrieri	65.38	6.00e-25	105.00
IUUC-Oba-075253	Oryza barthii	54.17	5.00e-27	114.00
IUUC-Obr-076102	Oryza brachyantha	64.95	4.00e-29	119.00
IUUC-Ogl-077524	Oryza glaberrima	65.69	2.00e-29	120.00
IUUC-Ogu-078833	Oryza glumaepatula	64.71	1.00e-28	119.00
IUUC-Oin-079853	Oryza indica	66.67	5.00e-24	102.00
IUUC-Oni-082095	Oryza nivara	62.75	2.00e-26	112.00
IUUC-Opu-083550	Oryza punctata	67.65	2.00e-30	124.00
IUUC-Oru-085007	Oryza rufipogon	65.69	6.00e-29	120.00
IUUC-Osa-085825	Oryza sativa	66.67	7.00e-24	102.00
IUUC-Sit-109686	Setaria italica	71.28	2.00e-25	107.00
IUUC-Sly-111913	Solanum lycopersicum	37.40	6.00e-25	105.00
IUUC-Stu-112550	Solanum tuberosum	36.72	1.00e-23	100.00
IUUC-Tae-122820	Triticum aestivum	57.59	2.00e-32	130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence