iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044374

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000841

Gene Name

LOC100798228; GLYMA_08G337200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA08G44880	GLYMA08G44880.1	GLYMA08G44880.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-13	51.7	211	248

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           gHt +vt+laf   d +ll+s + Dg ++vW +++g++
   Q: 211  GHTQRVTDLAFfaEDvHLLASVGTDGRVYVWKITEGPD 248
           8*********9998889***************999875 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MASPNNHNPP PPTIPFDMHS FFNPQPPPPP SSNPNPNPNH NPSSSYPPPF HFPNFDLPLP 60
PHPHHRSISF PTQPIPPPSN PNAGARLMAL LGNPSPAPPQ PPPPEFVPVS SSAVLAAASA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAAATTCT AGCAGTGGTG CTTGCAAGTT CCCTCCCATT GTCTTCCATC CTTCAGATCT 60
CTCTCTGCAC TCATCTCAAC CACTCTCGAT CTCTTCTGTT CTTCTCAAAT CCCACAATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000932--C:P-body
GO:0031087--P:deadenylation-independent decapping of nuclear-transcribed mRNA

KEGG

gmx:100798228

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005827	Arabidopsis lyrata	56.87	0.00e+00	1297.00
IUUC-Ath-006603	Arabidopsis thaliana	56.29	0.00e+00	1285.00
IUUC-Bdi-014662	Brachypodium distachyon	48.45	0.00e+00	1065.00
IUUC-Bol-015150	Brassica oleracea	55.87	0.00e+00	1188.00
IUUC-Bra-017673	Brassica rapa	56.56	0.00e+00	1204.00
IUUC-Loc-051778	Lepisosteus oculatus	26.64	3.00e-26	114.00
IUUC-Mtr-057751	Medicago truncatula	84.07	0.00e+00	1895.00
IUUC-Mac-064436	Musa acuminata	54.00	0.00e+00	1216.00
IUUC-Oba-075599	Oryza barthii	50.12	0.00e+00	1112.00
IUUC-Obr-076020	Oryza brachyantha	49.47	0.00e+00	1104.00
IUUC-Ogu-079010	Oryza glumaepatula	50.12	0.00e+00	1104.00
IUUC-Olo-080788	Oryza longistaminata	50.24	0.00e+00	1120.00
IUUC-Oni-082533	Oryza nivara	49.96	0.00e+00	1109.00
IUUC-Oru-084729	Oryza rufipogon	50.04	0.00e+00	1108.00
IUUC-Pop-100059	Populus trichocarpa	61.01	0.00e+00	1374.00
IUUC-Pca-100720	Procavia capensis	26.70	1.00e-06	48.90
IUUC-Ppe-101310	Prunus persica	68.09	0.00e+00	1423.00
IUUC-Sly-111353	Solanum lycopersicum	62.93	0.00e+00	1418.00
IUUC-Sbi-114653	Sorghum bicolor	51.22	0.00e+00	1125.00
IUUC-Tca-121694	Theobroma cacao	58.69	0.00e+00	1462.00
IUUC-Tur-126066	Triticum urartu	48.36	0.00e+00	984.00
IUUC-Vvi-130965	Vitis vinifera	68.34	0.00e+00	1546.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence