iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130887

UUCD1 version

UUC-ViV-00090

Ensembl Protein ID

VIT_04s0023g01920.t01

UniProt Accession

D7SPC5; D7SPC5_VITVI

Genbank Protein ID

CBI17504.3

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN594959

Gene Name

VIT_04s0023g01920

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_04s0023g01920	VIT_04s0023g01920.t01	VIT_04s0023g01920.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.40e-26	91.7	271	343

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +peef+CpIs  lM dPv++ sG+t++r  I+kw+++g+ tcP  +++l++  l+Pn+++++li +wc ++++
   Q: 271  PPEEFMCPISSRLMYDPVIIDSGVTFERMWIQKWFDEGHDTCPQSKKKLAKMLLTPNTAMKELILKWCMKHGI 343
           59******************************************************************99986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGTDATEVVP TLPRPNAVKV HQLMCTDLMN LVDRVLKILP EIEAARPCKA GRDALCSINL 60
AIEKAKSVLL DCSESSKLYL AISGTVIVLK CERIRSLLEK NLSQIQTMVP CMLNAQISRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAATTCTC ACCAGTTGTG AGGAACTAGA GGTCTTTCAA GCAAAAAGAT TATGTTCTTG 60
GATTTCTACT TTTCTTTCGC AGAAGATCTC GTGAACATTT GTTTGCAACT CTTCTCCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100251240

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000166	Aegilops tauschii	37.16	6.00e-116	411.00
IUUC-Aly-005788	Arabidopsis lyrata	39.66	7.00e-116	410.00
IUUC-Ath-006905	Arabidopsis thaliana	37.68	5.00e-113	400.00
IUUC-Bdi-014593	Brachypodium distachyon	36.35	5.00e-109	387.00
IUUC-Bol-016241	Brassica oleracea	38.07	3.00e-111	395.00
IUUC-Bra-018043	Brassica rapa	38.54	6.00e-116	410.00
IUUC-Gma-044030	Glycine max	48.67	0.00e+00	652.00
IUUC-Hvu-047756	Hordeum vulgare	37.17	2.00e-114	405.00
IUUC-Mtr-058215	Medicago truncatula	49.16	2.00e-178	618.00
IUUC-Mac-064841	Musa acuminata	37.24	3.00e-125	442.00
IUUC-Oba-075842	Oryza barthii	36.57	4.00e-109	388.00
IUUC-Obr-076217	Oryza brachyantha	36.30	8.00e-108	384.00
IUUC-Ogl-077921	Oryza glaberrima	36.57	5.00e-109	387.00
IUUC-Ogu-078199	Oryza glumaepatula	36.40	4.00e-107	381.00
IUUC-Oin-079116	Oryza indica	36.71	1.00e-109	389.00
IUUC-Olo-080352	Oryza longistaminata	35.57	7.00e-104	370.00
IUUC-Ome-081110	Oryza meridionalis	36.26	3.00e-107	382.00
IUUC-Oni-082415	Oryza nivara	36.82	8.00e-110	390.00
IUUC-Opu-083658	Oryza punctata	36.14	1.00e-106	380.00
IUUC-Oru-084974	Oryza rufipogon	36.26	3.00e-107	382.00
IUUC-Osa-086052	Oryza sativa	36.57	3.00e-109	388.00
IUUC-Pop-098901	Populus trichocarpa	57.20	0.00e+00	780.00
IUUC-Ppe-101895	Prunus persica	54.49	6.00e-142	496.00
IUUC-Sit-110432	Setaria italica	35.01	3.00e-103	368.00
IUUC-Sly-111406	Solanum lycopersicum	47.03	1.00e-158	552.00
IUUC-Stu-112174	Solanum tuberosum	46.85	3.00e-168	584.00
IUUC-Sbi-113885	Sorghum bicolor	36.21	2.00e-99	355.00
IUUC-Tca-121394	Theobroma cacao	53.07	0.00e+00	738.00
IUUC-Tae-125779	Triticum aestivum	37.17	3.00e-116	412.00
IUUC-Tur-126678	Triticum urartu	37.35	8.00e-108	384.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence