iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-006792

UUCD1 version

UUC-ArT-00897

Ensembl Protein ID

AT5G41400.1

UniProt Accession

Q9FN60; Q9FN60_ARATH

Genbank Protein ID

AAO22788.1; AAO42416.1; AED94674.1; BAB08512.1

Protein Name

Putative RING zinc finger protein; RING zinc finger protein-like; RING/U-box superfamily protein

Genbank Nucleotide ID

BT002979; BT004422; CP002688; AB006707

Gene Name

MYC6.11; MYC6_11; At5g41400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G41400	AT5G41400.1	AT5G41400.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.30e-10	39.8	105	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdg.plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f  +d+  ++++C+H+fh++Cl +w     + +++ +CPlCr
   Q: 105  CAVCLHEFenDDEiRRLTNCQHIFHRSCLDRW----MMGYNQMTCPLCR 149
           ********77333345799*************....78**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGYPVGYTEL LLPRIFLHLL SLLGLIRTLI DTGFRILGLP DFLESDPVSS SSSWLEPPYM 60
STAAHHHQES SFFFPVAARL AGEILPVIRF SELTRPGFGS GSDCCAVCLH EFENDDEIRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAGCATA ATAATATTTA CTAATTAATT ATGTAAGTAT GTACATATTC ATATATCACT 60
GAGTATATAT ATCCTACTCA TCTCTGCCTT TTTCTCTCGT TCCCAACTCC TTACGCGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G41400

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005489	Arabidopsis lyrata	94.32	5.00e-75	272.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence