iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014639

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100841846; BRADI_3g58350

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G58350	BRADI3G58350.1	BRADI3G58350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.40e-08	34.4	145	187

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f+d+  +++lp C H+fh dC+ +w         + +CP+Cr
   Q: 145  CAVCLSEFEDEekLRLLPrCSHAFHPDCIGAW------LASHVTCPVCR 187
           ********55555999999*************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDMLLAALLV ACALASSGTA QPTPPGKSYD YTAGAGSQQP PQQDMAVSTT MIALLAGAVA 60
VFVFIALSII YLRHCTGYYD NAYTADRSTL PGAMDGSTFI SRRHRQHRGT ASTRGLDKEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCTCCGAG AAACTACGCT ACTGCAGGCG CAGGCGCAGG TAACTTCAGC TAGGCAAGGA 60
GAAAATACGC ACTAAACATG GACATGCTGC TCGCCGCGCT CCTTGTGGCG TGCGCTCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100841846

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Afu-009087	Aspergillus fumigatus	36.94	1.00e-13	68.90
IUUC-Hvu-047096	Hordeum vulgare	56.99	5.00e-83	300.00
IUUC-Lpe-051304	Leersia perrieri	49.04	1.00e-70	259.00
IUUC-Obr-076795	Oryza brachyantha	51.44	1.00e-58	219.00
IUUC-Ogl-077862	Oryza glaberrima	48.82	2.00e-61	228.00
IUUC-Ogu-078376	Oryza glumaepatula	48.29	6.00e-61	227.00
IUUC-Oin-079432	Oryza indica	48.56	2.00e-61	229.00
IUUC-Olo-080975	Oryza longistaminata	49.48	1.00e-48	185.00
IUUC-Ome-081871	Oryza meridionalis	54.93	3.00e-57	214.00
IUUC-Oni-082727	Oryza nivara	48.56	2.00e-61	229.00
IUUC-Opu-083865	Oryza punctata	48.94	9.00e-71	259.00
IUUC-Oru-084529	Oryza rufipogon	49.08	8.00e-62	230.00
IUUC-Osa-086269	Oryza sativa	49.08	9.00e-62	229.00
IUUC-Ola-087372	Oryzias latipes	41.18	2.00e-15	76.30
IUUC-Sit-110282	Setaria italica	53.36	8.00e-48	183.00
IUUC-Sbi-114463	Sorghum bicolor	58.56	5.00e-64	237.00
IUUC-Tae-124596	Triticum aestivum	54.52	4.00e-79	287.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence