iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099755

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_415652; POPTR_0006s26310g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s26310	POPTR_0006s26310.1	POPTR_0006s26310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-07	33.1	359	400

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  f   d+++ lpC H+fh++C+ kw       + +++CPlC+
   Q: 359  CCICLAKFanNDELRELPCSHFFHKECVDKW------LKINASCPLCK 400
           ********99666******************......**********7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDVPSTELHS ESQTDTFPLL MERPENLNSS AHIIDIPRNI EVPGSPSHDR ISSGLEASSH 60
EDRPSSGVRA PSTQPSTSLS NGTNSRSSSL IRRGEARRRR SPLNSGLWIS VELVLTLSQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGAGGTCCA AAGCTGACTC TTTATCTTTT CGTTTCTCTC TCCTTTTATT TTTTTTAAAA 60
TATCAAAGTT ACCAGCTCTC TCTCTTTCAC TCTCTGCACC AAAGCGACAC CGTTCTCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0006s26310g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000618	Aegilops tauschii	57.14	1.00e-121	429.00
IUUC-Aly-005824	Arabidopsis lyrata	69.65	7.00e-135	473.00
IUUC-Ath-007421	Arabidopsis thaliana	69.65	2.00e-136	478.00
IUUC-Bdi-014783	Brachypodium distachyon	55.01	5.00e-108	384.00
IUUC-Bol-015448	Brassica oleracea	67.78	1.00e-131	462.00
IUUC-Bra-017950	Brassica rapa	68.04	9.00e-129	452.00
IUUC-Hvu-047447	Hordeum vulgare	57.14	2.00e-122	431.00
IUUC-Lpe-050851	Leersia perrieri	56.05	3.00e-120	424.00
IUUC-Mtr-058402	Medicago truncatula	67.18	2.00e-121	428.00
IUUC-Mac-065365	Musa acuminata	58.21	2.00e-108	385.00
IUUC-Oba-075730	Oryza barthii	56.99	2.00e-119	422.00
IUUC-Obr-076189	Oryza brachyantha	58.76	8.00e-120	422.00
IUUC-Ogl-077454	Oryza glaberrima	56.99	2.00e-119	422.00
IUUC-Ogu-078902	Oryza glumaepatula	57.25	1.00e-120	425.00
IUUC-Oin-079324	Oryza indica	56.99	2.00e-119	421.00
IUUC-Olo-080365	Oryza longistaminata	57.25	2.00e-120	424.00
IUUC-Oni-082514	Oryza nivara	56.99	2.00e-119	422.00
IUUC-Opu-083647	Oryza punctata	56.99	4.00e-120	424.00
IUUC-Ppa-095270	Physcomitrella patens	60.38	1.00e-79	290.00
IUUC-Sit-109918	Setaria italica	57.58	4.00e-117	414.00
IUUC-Sly-111768	Solanum lycopersicum	63.21	2.00e-124	438.00
IUUC-Stu-112684	Solanum tuberosum	63.90	3.00e-118	417.00
IUUC-Sbi-113823	Sorghum bicolor	57.62	5.00e-119	420.00
IUUC-Tca-121104	Theobroma cacao	78.97	2.00e-177	614.00
IUUC-Tur-126522	Triticum urartu	54.03	5.00e-87	314.00
IUUC-Vvi-131601	Vitis vinifera	73.20	2.00e-139	488.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence