iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112684

Ensembl Protein ID

PGSC0003DMT400083821

UniProt Accession

M1D769; M1D769_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400033616	PGSC0003DMT400083821	PGSC0003DMT400083821

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-07	32.7	336	377

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  +   d+++ lpC H+fh+dC+ kw       + + +CPlC+
   Q: 336  CCICLAKYvnNDELRELPCSHFFHKDCVDKW------LKINNSCPLCK 377
           ******9999666******************......**********7 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MEQADNRSNN EHVIDITSSN DASSSSNPHD RPVNNVLHVQ AEHPPSTSTT VPVSQHAFSS 60
ANRSNLRNSS FARRGNGRRH RSPLNSVLWI SIELVLTMSQ IIAAIAVLAI SRDEHPRAPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGCAATCA AAATACTCAC CAAAGAGAAA TAGCTGACGC CATATATTAT TTGGGTAAAA 60
AAATCAGGTA TATACCCAAA GAGAGAAAAC GCGTAAACTG AGAAATCCAG AGCTCAACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000618	Aegilops tauschii	55.81	2.00e-111	395.00
IUUC-Aly-005824	Arabidopsis lyrata	64.32	7.00e-110	389.00
IUUC-Ath-007421	Arabidopsis thaliana	64.06	2.00e-110	390.00
IUUC-Bdi-014783	Brachypodium distachyon	62.65	2.00e-105	374.00
IUUC-Bol-015448	Brassica oleracea	70.39	8.00e-109	385.00
IUUC-Bra-017950	Brassica rapa	70.00	5.00e-107	379.00
IUUC-Dme-031973	Drosophila melanogaster	36.73	4.00e-13	69.70
IUUC-Gma-043223	Glycine max	60.78	4.00e-104	370.00
IUUC-Hvu-047399	Hordeum vulgare	63.37	2.00e-83	301.00
IUUC-Lpe-050851	Leersia perrieri	55.64	2.00e-109	387.00
IUUC-Mtr-058402	Medicago truncatula	59.95	2.00e-105	374.00
IUUC-Mac-065365	Musa acuminata	58.40	3.00e-94	337.00
IUUC-Oba-075086	Oryza barthii	60.82	6.00e-82	296.00
IUUC-Obr-076189	Oryza brachyantha	55.61	2.00e-112	398.00
IUUC-Ogl-077290	Oryza glaberrima	60.82	6.00e-82	296.00
IUUC-Ogu-078902	Oryza glumaepatula	56.22	1.00e-111	394.00
IUUC-Oin-079535	Oryza indica	60.82	1.00e-81	295.00
IUUC-Olo-080365	Oryza longistaminata	56.22	2.00e-111	394.00
IUUC-Ome-081533	Oryza meridionalis	60.82	2.00e-80	291.00
IUUC-Oni-082514	Oryza nivara	55.96	1.00e-110	391.00
IUUC-Opu-083647	Oryza punctata	55.96	3.00e-111	394.00
IUUC-Oru-084956	Oryza rufipogon	60.50	2.00e-81	295.00
IUUC-Osa-085907	Oryza sativa	60.82	1.00e-81	295.00
IUUC-Ppa-095745	Physcomitrella patens	58.47	3.00e-83	301.00
IUUC-Pop-099755	Populus trichocarpa	65.37	2.00e-129	454.00
IUUC-Ppe-102005	Prunus persica	69.06	3.00e-132	463.00
IUUC-Ptt-103787	Puccinia triticina	50.00	7.00e-12	62.80
IUUC-Sha-106516	Sarcophilus harrisii	42.67	5.00e-14	71.60
IUUC-Smo-108799	Selaginella moellendorffii	60.19	2.00e-89	321.00
IUUC-Sit-109918	Setaria italica	55.87	8.00e-108	382.00
IUUC-Sly-111768	Solanum lycopersicum	97.01	3.00e-168	583.00
IUUC-Sbi-113823	Sorghum bicolor	55.50	1.00e-109	388.00
IUUC-Tca-121104	Theobroma cacao	67.35	2.00e-131	461.00
IUUC-Tae-123033	Triticum aestivum	64.01	9.00e-85	305.00
IUUC-Tur-126522	Triticum urartu	63.69	9.00e-83	300.00
IUUC-Vvi-131601	Vitis vinifera	67.78	1.00e-117	415.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence