iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014702

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000882

Gene Name

LOC100835332; BRADI_3g60810

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G60810	BRADI3G60810.1	BRADI3G60810.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-25	89.8	23	97

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           e+f+Cp++ ++M+dPv++++G+t++r++I kw+++++      tcP+t+++l+++ ++P+++lr++i++w+++n+
   Q: 23   EAFMCPLTRQVMQDPVTIETGQTFEREAILKWFKECRDngrraTCPLTQTELRSTAITPSIALRNVIDEWRARNE 97
           89*******************************6666666679*****************************997 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAHNSDGELE EQSNEGYQEA AFEAFMCPLT RQVMQDPVTI ETGQTFEREA ILKWFKECRD 60
NGRRATCPLT QTELRSTAIT PSIALRNVID EWRARNEEKD LEKACNALGM HPESGEEDET 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCATA ATTCAGACGG CGAGCTGGAG GAGCAATCGA ACGAGGGTTA CCAGGAGGCG 60
GCGTTCGAGG CCTTCATGTG CCCTCTCACC AGGCAGGTGA TGCAGGACCC GGTCACCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100835332

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000956	Aegilops tauschii	91.10	0.00e+00	920.00
IUUC-Hvu-047350	Hordeum vulgare	85.75	0.00e+00	1313.00
IUUC-Lpe-051625	Leersia perrieri	70.29	0.00e+00	1053.00
IUUC-Oba-075990	Oryza barthii	68.21	0.00e+00	1050.00
IUUC-Obr-076196	Oryza brachyantha	70.55	0.00e+00	862.00
IUUC-Ogl-077850	Oryza glaberrima	70.50	0.00e+00	1094.00
IUUC-Ogu-078913	Oryza glumaepatula	68.13	0.00e+00	1079.00
IUUC-Oin-079057	Oryza indica	70.42	0.00e+00	1094.00
IUUC-Olo-080442	Oryza longistaminata	61.06	0.00e+00	686.00
IUUC-Ome-081744	Oryza meridionalis	71.63	0.00e+00	1096.00
IUUC-Oni-082927	Oryza nivara	68.13	0.00e+00	1079.00
IUUC-Opu-083417	Oryza punctata	70.23	0.00e+00	1075.00
IUUC-Oru-085059	Oryza rufipogon	68.13	0.00e+00	1079.00
IUUC-Osa-085409	Oryza sativa	70.42	0.00e+00	1094.00
IUUC-Sit-110197	Setaria italica	75.61	0.00e+00	1141.00
IUUC-Sbi-113974	Sorghum bicolor	73.66	0.00e+00	1148.00
IUUC-Tae-125341	Triticum aestivum	85.63	0.00e+00	1303.00
IUUC-Tur-126270	Triticum urartu	88.07	0.00e+00	838.00
IUUC-Ttr-128602	Tursiops truncatus	27.50	7.00e-06	43.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence