iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015955

Ensembl Protein ID

Bo8g070380.1

UniProt Accession

A0A0D3DQM5; A0A0D3DQM5_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo8g070380	Bo8g070380.1	Bo8g070380.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.10e-26	92.7	19	95

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++e+f+Cp+++e+M+dPv+l++G t++r++Iekw+++++      +cP+t+q+l++ d+ P+++lr++i++w+ +n+
   Q: 19   IYEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKKCQDsnkppSCPITSQELSSADVSPSIALRNTIEEWRWRND 95
           89*********************************7777777799***************************98886 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MDGSESDDSS HFERGVDHIY EAFICPLTKE VMHDPVTLEN GRTFEREAIE KWFKKCQDSN 60
KPPSCPITSQ ELSSADVSPS IALRNTIEEW RWRNDAAKLD VARQALFLGN DESDVLQALM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGGAA GCGAGTCAGA CGACAGCTCT CATTTCGAGC GAGGCGTAGA CCACATCTAC 60
GAAGCATTCA TCTGCCCCTT GACAAAAGAA GTCATGCACG ACCCCGTCAC GTTAGAGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000143	Aegilops tauschii	57.64	0.00e+00	834.00
IUUC-Bdi-014487	Brachypodium distachyon	56.64	0.00e+00	819.00
IUUC-Bra-017511	Brassica rapa	97.62	0.00e+00	1480.00
IUUC-Hvu-047783	Hordeum vulgare	57.77	0.00e+00	843.00
IUUC-Lpe-050971	Leersia perrieri	58.38	0.00e+00	811.00
IUUC-Oba-075225	Oryza barthii	58.38	0.00e+00	842.00
IUUC-Obr-076103	Oryza brachyantha	58.38	0.00e+00	811.00
IUUC-Ogl-077529	Oryza glaberrima	58.38	0.00e+00	841.00
IUUC-Ogu-078735	Oryza glumaepatula	58.12	0.00e+00	838.00
IUUC-Oin-079422	Oryza indica	58.38	0.00e+00	840.00
IUUC-Oni-082690	Oryza nivara	58.38	0.00e+00	840.00
IUUC-Opu-083157	Oryza punctata	58.38	0.00e+00	840.00
IUUC-Oru-085058	Oryza rufipogon	58.38	0.00e+00	840.00
IUUC-Osa-086000	Oryza sativa	58.38	0.00e+00	840.00
IUUC-Ppa-096021	Physcomitrella patens	44.19	0.00e+00	645.00
IUUC-Ppe-101973	Prunus persica	63.52	0.00e+00	963.00
IUUC-Sit-110490	Setaria italica	57.83	0.00e+00	829.00
IUUC-Sbi-113974	Sorghum bicolor	49.76	0.00e+00	709.00
IUUC-Tae-125341	Triticum aestivum	51.11	0.00e+00	697.00
IUUC-Tur-126573	Triticum urartu	57.27	0.00e+00	833.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence