iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114670

Ensembl Protein ID

Sb05g002020.1

UniProt Accession

C5Y417; C5Y417_SORBI

Genbank Protein ID

EES09202.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G024400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g002020	Sb05g002020.1	Sb05g002020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-07	30.9	189	220

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           H+  +t++++  ++   l++ s D+++ +WDl
   Q: 189  HKKAITSIEWspHEaSSLAVTSEDHQLTIWDL 220
           8889******9644778**************7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MCLVAASPVV PVAHLCPTFS IRLRSLPVWD LSSILNSLAE SATPAPKEDD VIHRQTPVKV 60
FSGHKAEGYA VDWSPLVTGS LFLVTAIRAF TCGSRLHLTG TGVPQKPTYL PLVPPMEQYQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGCTTGG TTGCCGCGTC TCCTGTTGTG CCTGTAGCGC ACCTCTGTCC AACCTTCAGC 60
ATCCGGCTCA GATCTCTGCC GGTTCGTCCT GTCTTCACCT TGGGAAGCAG CAGACGGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

sbi:SORBI_05g002020

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence