iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014469

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000883

Gene Name

BRADI_4g42670

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G42670	BRADI4G42670.1	BRADI4G42670.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.10e-08	33.1	232	275

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHv..fhadClqkwpglknssskefrCPlCr 46
           C iCle++   +++ v+pC H   fh++Cl++w         + +CPlCr
   Q: 232  CVICLEEYevGEELSVVPCEHRheFHRSCLEQW------LALSRLCPLCR 275
           ********88445999***98447*********......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDDDDDDDAQ LLVGHDDLSL EERRLATTNS EEEELDDTMP PPGFELGPWG SHGGQGGADV 60
STAESWDIMW PYYYTPGSPG PAPPPTGPSW SSWERVTPQH GRSHGHGSDL DWASHGQGAD 120

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Nucleotide Sequence
(Fasta)

ATGGACGATG ATGACGACGA CGACGCCCAG CTGCTTGTAG GCCATGACGA CCTAAGCCTC 60
GAGGAGCGCC GTCTCGCCAC AACGAACAGC GAAGAAGAAG AGCTTGATGA TACCATGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001014	Aegilops tauschii	44.30	8.00e-14	68.90
IUUC-Ogl-076939	Oryza glaberrima	48.31	5.00e-16	77.40
IUUC-Ppe-101140	Prunus persica	41.98	8.00e-14	69.70
IUUC-Pgr-103393	Puccinia graminis	44.23	4.00e-10	57.80
IUUC-Sit-110430	Setaria italica	51.81	2.00e-25	108.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence