iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005690

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

F-box family protein

Genbank Nucleotide ID

GL348717

Gene Name

ARALYDRAFT_906562

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_502266.1	scaffold_502266.1	scaffold_502266.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-14	53.5	117	147

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrt 32
           H+++v+ ++    +ll++G +D+++++W+l++
   Q: 117  HSNRVSQCRMkK-GLLLTGVGDKVMRLWSLKS 147
           999999999943.99**************987 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGITETGDES SGRKTRRRIS PSIESLDADI LCIIFSFLDL FDLVHCTVVC NSWHAVIKKL 60
KLLQASCRKM HHLGSDFPSS STSLDGPAEI DVEDFAMKHH KMALLRGRIE IERWEAHSNR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCTGTCTG CTTGGAAAAA AAAAAATGGG GATAACAGAG ACCGGCGACG AATCGTCGGG 60
GAGAAAGACG CGACGTAGAA TATCACCATC GATCGAATCT CTAGACGCCG ATATACTATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00646--F-box

SMART

SM00256--FBOX
SM00320--WD40

KEGG

aly:ARALYDRAFT_906562

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003151	Amborella trichopoda	46.06	2.00e-95	342.00
IUUC-Ath-006699	Arabidopsis thaliana	89.43	0.00e+00	798.00
IUUC-Bdi-014108	Brachypodium distachyon	41.46	7.00e-99	353.00
IUUC-Bol-015377	Brassica oleracea	83.89	0.00e+00	763.00
IUUC-Bra-016934	Brassica rapa	84.72	1.00e-179	621.00
IUUC-Gma-043394	Glycine max	50.57	1.00e-122	432.00
IUUC-Lpe-051613	Leersia perrieri	37.38	2.00e-86	312.00
IUUC-Mtr-057690	Medicago truncatula	49.40	3.00e-118	417.00
IUUC-Mac-064938	Musa acuminata	46.27	2.00e-89	321.00
IUUC-Oba-075418	Oryza barthii	43.47	1.00e-90	325.00
IUUC-Obr-076882	Oryza brachyantha	40.89	7.00e-98	350.00
IUUC-Ogl-077438	Oryza glaberrima	41.71	3.00e-98	351.00
IUUC-Ogu-078943	Oryza glumaepatula	41.94	2.00e-98	352.00
IUUC-Oin-079069	Oryza indica	41.71	5.00e-98	350.00
IUUC-Olo-080409	Oryza longistaminata	36.93	2.00e-81	295.00
IUUC-Oni-083056	Oryza nivara	41.47	5.00e-97	347.00
IUUC-Opu-084172	Oryza punctata	41.88	9.00e-100	356.00
IUUC-Oru-085030	Oryza rufipogon	41.71	6.00e-98	350.00
IUUC-Osa-085520	Oryza sativa	41.71	6.00e-98	350.00
IUUC-Ppa-095450	Physcomitrella patens	25.40	2.00e-39	155.00
IUUC-Pop-099796	Populus trichocarpa	56.90	7.00e-134	469.00
IUUC-Ppe-101252	Prunus persica	53.29	2.00e-123	435.00
IUUC-Smo-109369	Selaginella moellendorffii	31.54	6.00e-39	154.00
IUUC-Sit-109830	Setaria italica	40.05	1.00e-95	342.00
IUUC-Sly-111786	Solanum lycopersicum	51.40	2.00e-113	401.00
IUUC-Sbi-114102	Sorghum bicolor	41.61	7.00e-97	347.00
IUUC-Tca-121562	Theobroma cacao	57.41	3.00e-132	464.00
IUUC-Tae-123446	Triticum aestivum	40.97	7.00e-96	343.00
IUUC-Tur-126707	Triticum urartu	35.37	2.00e-69	256.00
IUUC-Vvi-131441	Vitis vinifera	54.16	2.00e-135	474.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence