iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131441

UUCD1 version

UUC-ViV-00161

Ensembl Protein ID

VIT_13s0064g00010.t01

UniProt Accession

D7T397; D7T397_VITVI

Genbank Protein ID

CBI24978.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595509

Gene Name

VIT_13s0064g00010

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_13s0064g00010	VIT_13s0064g00010.t01	VIT_13s0064g00010.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-16	60.2	281	314

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           +++ l+f +  +l+ sGs  g   +WDlrt ++l
   Q: 281  GIRTLCFnPRsHLVFSGSTAGYASCWDLRTMRPL 314
           4999***9444999***************98765 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MDGTTADGQS QAQKRMSSRV PATSLAHDIL CMIFVLLDLF DLVRCSAVCK SWNKVINKSK 60
LLQILYHKQQ GGSIGPSSTS HCSEKPLKVC IEQLAMEHHR LSLQGLIDIE QWKGHSVRAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGGGA CCACCGCGGA CGGCCAGTCA CAGGCCCAGA AGAGGATGAG CTCAAGAGTT 60
CCAGCCACAA GCCTCGCTCA CGATATTCTC TGCATGATTT TCGTGCTTCT CGATCTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS50294--WD_REPEATS_REGION

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX
SM00320--WD40

KEGG

vvi:100243045

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003151	Amborella trichopoda	50.71	2.00e-111	394.00
IUUC-Aly-005690	Arabidopsis lyrata	54.16	3.00e-141	494.00
IUUC-Ath-006699	Arabidopsis thaliana	52.99	5.00e-140	489.00
IUUC-Bdi-014108	Brachypodium distachyon	48.94	4.00e-116	410.00
IUUC-Bol-015377	Brassica oleracea	57.18	3.00e-147	514.00
IUUC-Bra-016934	Brassica rapa	61.33	3.00e-127	447.00
IUUC-Gma-043394	Glycine max	58.25	1.00e-139	488.00
IUUC-Lpe-051613	Leersia perrieri	46.86	9.00e-106	375.00
IUUC-Mtr-057690	Medicago truncatula	56.33	2.00e-139	488.00
IUUC-Mac-064938	Musa acuminata	60.46	4.00e-110	390.00
IUUC-Oba-075418	Oryza barthii	50.13	1.00e-107	382.00
IUUC-Obr-076882	Oryza brachyantha	50.60	5.00e-119	420.00
IUUC-Ogl-077438	Oryza glaberrima	50.12	9.00e-120	422.00
IUUC-Ogu-078943	Oryza glumaepatula	50.36	8.00e-120	422.00
IUUC-Oin-079069	Oryza indica	50.12	2.00e-119	421.00
IUUC-Olo-080409	Oryza longistaminata	45.67	1.00e-101	362.00
IUUC-Oni-083056	Oryza nivara	49.88	2.00e-118	417.00
IUUC-Opu-084172	Oryza punctata	50.24	3.00e-118	417.00
IUUC-Oru-085030	Oryza rufipogon	49.88	8.00e-119	419.00
IUUC-Osa-085520	Oryza sativa	49.88	8.00e-119	419.00
IUUC-Ppa-095450	Physcomitrella patens	29.01	8.00e-43	167.00
IUUC-Pop-099796	Populus trichocarpa	66.75	2.00e-158	551.00
IUUC-Ppe-101252	Prunus persica	64.55	9.00e-154	535.00
IUUC-Smo-108718	Selaginella moellendorffii	30.65	2.00e-30	125.00
IUUC-Sit-109830	Setaria italica	52.32	2.00e-117	415.00
IUUC-Sly-111786	Solanum lycopersicum	60.73	3.00e-136	477.00
IUUC-Sbi-114102	Sorghum bicolor	54.00	6.00e-123	433.00
IUUC-Tca-121562	Theobroma cacao	67.00	2.00e-150	525.00
IUUC-Tae-123446	Triticum aestivum	50.96	3.00e-118	417.00
IUUC-Tur-126707	Triticum urartu	43.18	2.00e-89	322.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence