iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109382

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377687

Gene Name

SELMODRAFT_229638

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_229638	EFJ07215	EFJ07215

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-40	135.3	235	274
UBD/Beta-Prp	7.10e-54	183.7	31	306

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+++v ++a  +d   l+s+s D t+++WDl+t  +++s
   Q: 235  GHASWVLSVAGsPDgAALASASSDRTVRLWDLKTRSCVQS 274
           8***********99788*****************999986 PP

UBD/Beta-Prp

   S: 23   sllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsg.dklvsGshdrtirvwd 122
            +l+tgs+d+++kvw+ ++  l r+ sg++ +v av  spdg + + +s D +++++d+++++++ tl+ + ++++ ++f+p+g    v+G+    +++w+
   Q: 31   AVLLTGSADESVKVWKGDELELERTNSGNSLGVVAVAASPDGRVAACTSLDSVVRIFDVDSNSTLATLESKPAEAWQMQFHPKGeLLAVAGGGSGCVNIWK 131
           589*******************************************************************************9955668999********* PP
   S: 123  letgqclee......tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvr 216
            ++g+   +       + g  ++v +v+++pdg+ll+ +s D+t+ ++d+++gk+l+tl g h  +v++l+f++   ++l ++ +d+ v ++d +  + v 
   Q: 132  ASSGSRETSlkaesvDKVGGGKFVLSVAWSPDGKLLACSSMDGTIAVFDVARGKMLHTLDG-HSMPVRCLAFSPVEpRYLFTACDDKHVHMYDAEGRSLVS 231
           *****999888888555577899*************************************9.************8779999******************** PP
   S: 217  tlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwkl 294
           ++ gh ++v+sv+ sp++  l+s+ssD+++r+Wdl+++ ++++l+ h+++v+ va+       l+++++d ++ ++++
   Q: 232  AMSGHASWVLSVAGSPDGAALASASSDRTVRLWDLKTRSCVQSLTEHKDQVWGVAF---RPGRLATVADDRSICLYDY 306
           ********************************************************...6666777778888888876 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MKLVSIKSLA NAHGDGVWAV AWAAATGDRP AVLLTGSADE SVKVWKGDEL ELERTNSGNS 60
LGVVAVAASP DGRVAACTSL DSVVRIFDVD SNSTLATLES KPAEAWQMQF HPKGELLAVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGTTTATGA GATGAAGCTC GTGAGCATCA AGAGCTTGGC CAACGCGCAC GGCGATGGAG 60
TGTGGGCGGT GGCGTGGGCA GCAGCAACCG GCGATCGTCC AGCAGTGCTG CTCACGGGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_229638

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000774	Aegilops tauschii	50.00	8.00e-84	302.00
IUUC-Acl-008297	Aspergillus clavatus	36.02	6.00e-21	94.40
IUUC-Ame-011511	Astyanax mexicanus	42.19	1.00e-61	229.00
IUUC-Bdi-015020	Brachypodium distachyon	56.83	3.00e-85	307.00
IUUC-Cre-022602	Chlamydomonas reinhardtii	44.01	3.00e-51	194.00
IUUC-Cin-025261	Ciona intestinalis	40.43	3.00e-58	218.00
IUUC-Cne-026846	Cryptococcus neoformans	30.92	3.00e-28	118.00
IUUC-Dre-027706	Danio rerio	35.12	5.00e-42	163.00
IUUC-Dme-031836	Drosophila melanogaster	42.55	4.00e-60	224.00
IUUC-Gmo-039579	Gadus morhua	44.15	3.00e-64	237.00
IUUC-Gac-042100	Gasterosteus aculeatus	43.48	5.00e-64	236.00
IUUC-Gma-044408	Glycine max	61.68	8.00e-108	382.00
IUUC-Hvu-047591	Hordeum vulgare	55.28	5.00e-86	310.00
IUUC-Lch-049549	Latimeria chalumnae	40.47	1.00e-56	212.00
IUUC-Loc-052540	Lepisosteus oculatus	42.14	8.00e-58	216.00
IUUC-Lma-052992	Leptosphaeria maculans	26.10	2.00e-23	102.00
IUUC-Meu-056075	Macropus eugenii	43.13	4.00e-59	220.00
IUUC-Mtr-057728	Medicago truncatula	61.99	2.00e-102	364.00
IUUC-Mdo-062758	Monodelphis domestica	43.14	7.00e-63	233.00
IUUC-Mmu-063580	Mus musculus	42.47	9.00e-59	219.00
IUUC-Mac-064880	Musa acuminata	62.93	3.00e-109	387.00
IUUC-Ont-071981	Oreochromis niloticus	42.81	1.00e-62	232.00
IUUC-Oan-073223	Ornithorhynchus anatinus	42.51	6.00e-46	176.00
IUUC-Oba-075255	Oryza barthii	61.69	1.00e-77	281.00
IUUC-Ogl-077777	Oryza glaberrima	57.89	5.00e-84	303.00
IUUC-Ogu-078780	Oryza glumaepatula	57.89	5.00e-84	303.00
IUUC-Ome-081421	Oryza meridionalis	57.28	2.00e-84	304.00
IUUC-Opu-083931	Oryza punctata	58.39	4.00e-86	310.00
IUUC-Oru-084645	Oryza rufipogon	57.89	5.00e-84	303.00
IUUC-Ola-086696	Oryzias latipes	42.14	9.00e-60	222.00
IUUC-Pma-094608	Petromyzon marinus	42.11	3.00e-55	207.00
IUUC-Ppa-095737	Physcomitrella patens	65.53	1.00e-116	411.00
IUUC-Pfo-096479	Poecilia formosa	42.81	8.00e-59	219.00
IUUC-Ppe-102056	Prunus persica	59.94	5.00e-105	373.00
IUUC-Rno-105826	Rattus norvegicus	42.47	2.00e-58	218.00
IUUC-Sha-106660	Sarcophilus harrisii	42.81	2.00e-59	221.00
IUUC-Sja-107800	Schizosaccharomyces japonicus	29.60	1.00e-28	119.00
IUUC-Spo-108244	Schizosaccharomyces pombe	27.80	1.00e-29	122.00
IUUC-Sit-110048	Setaria italica	57.76	6.00e-83	300.00
IUUC-Sly-111249	Solanum lycopersicum	53.56	2.00e-91	328.00
IUUC-Stu-112543	Solanum tuberosum	54.18	6.00e-92	329.00
IUUC-Sar-113743	Sorex araneus	43.01	3.00e-39	154.00
IUUC-Sbi-114309	Sorghum bicolor	56.83	8.00e-82	296.00
IUUC-Tru-117933	Takifugu rubripes	42.47	6.00e-63	233.00
IUUC-Tni-120191	Tetraodon nigroviridis	40.74	1.00e-49	188.00
IUUC-Tca-120983	Theobroma cacao	60.38	7.00e-102	362.00
IUUC-Tae-123999	Triticum aestivum	55.90	4.00e-84	303.00
IUUC-Tur-126711	Triticum urartu	55.11	2.00e-81	294.00
IUUC-Vvi-130981	Vitis vinifera	60.12	5.00e-103	366.00
IUUC-Xtr-132460	Xenopus tropicalis	43.14	2.00e-61	228.00
IUUC-Xma-134154	Xiphophorus maculatus	42.81	4.00e-59	220.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence