iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014323

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000883

Gene Name

BRADI_4g09390

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G09390	BRADI4G09390.1	BRADI4G09390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-07	32.1	109	151

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+df dg  ++vlp C H fha C+  w        ++++CPlCr
   Q: 109  CPVCLCDFADGeaLRVLPaCMHYFHAACVGEW------LHRNDTCPLCR 151
           ********6666699*****************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MSGDDSSDPQ RPSSGGGGGG YGGLGPSGYT AGVAVLVSLL LIVALVRLLR YAIRRSSKPP 60
VQHPAAAAAA GAPSAPLEVA VEMAAAVAPA AGVCVATYRR SDGWREASCP VCLCDFADGE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGGAG ACGACAGCAG CGACCCGCAG CGTCCGAGCT CCGGCGGCGG CGGCGGCGGC 60
TATGGCGGGC TGGGCCCGTC GGGGTACACG GCGGGAGTGG CCGTGCTCGT CAGCCTGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Oba-075384	Oryza barthii	71.93	3.00e-22	98.20
IUUC-Obr-076661	Oryza brachyantha	70.91	5.00e-22	97.10
IUUC-Ogl-077269	Oryza glaberrima	71.93	7.00e-23	99.00
IUUC-Ogu-078767	Oryza glumaepatula	42.42	2.00e-22	97.40
IUUC-Oin-080159	Oryza indica	71.93	8.00e-23	99.00
IUUC-Oni-082919	Oryza nivara	71.93	8.00e-23	99.00
IUUC-Opu-083960	Oryza punctata	41.67	2.00e-22	99.00
IUUC-Oru-084695	Oryza rufipogon	70.18	2.00e-21	95.90
IUUC-Sbi-114034	Sorghum bicolor	76.79	7.00e-23	99.80
IUUC-Tae-124753	Triticum aestivum	87.23	1.00e-22	97.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence