iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oin-079337

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

CM000129

Gene Name

OsI_17037

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGIOSGA016945	BGIOSGA016945-TA	BGIOSGA016945-PA

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	23571674

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	1.60e-05	26.3	249	290

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+  +   ++ +  lpC H++h++C+ kw       + +  CP+C+
   Q: 249  CVICCMTYknrDR-LTKLPCEHQYHQTCVTKW------LKINKVCPVCN 290
           9***999966444.777***************......**********7 PP

Organism

Oryza indica

Protein Sequence
(Fasta)

MKEKTLAMVS GLPSARMMRQ SRASWVYQLS PMTCAVAGTS TLVSMEVMHD TTGKKEVVVC 60
YMNAPLPYMI EENYGGCFFE DDVDLAQVLQ DQEIVYQLIQ GNYGTGSSKT HSNPSSSYSH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGGAGA AGACGTTAGC GATGGTTTCG GGCTTGCCTA GCGCGAGGAT GATGCGGCAA 60
AGTAGGGCTT CGTGGGTGTA CCAGCTGTCA CCAATGACGT GTGCTGTTGC CGGCACTAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001097	Aegilops tauschii	75.00	3.00e-96	343.00
IUUC-Atr-002961	Amborella trichopoda	44.49	9.00e-43	166.00
IUUC-Bdi-014232	Brachypodium distachyon	74.02	5.00e-99	352.00
IUUC-Cre-022675	Chlamydomonas reinhardtii	31.05	4.00e-19	87.00
IUUC-Hvu-047115	Hordeum vulgare	74.90	5.00e-96	343.00
IUUC-Lpe-050767	Leersia perrieri	87.11	5.00e-125	440.00
IUUC-Mac-064794	Musa acuminata	53.70	5.00e-73	266.00
IUUC-Oba-075838	Oryza barthii	99.61	9.00e-136	474.00
IUUC-Obr-076076	Oryza brachyantha	91.73	3.00e-121	426.00
IUUC-Ogl-077025	Oryza glaberrima	99.61	9.00e-136	474.00
IUUC-Ogu-078855	Oryza glumaepatula	99.61	1.00e-137	481.00
IUUC-Olo-080778	Oryza longistaminata	94.83	7.00e-138	482.00
IUUC-Ome-081351	Oryza meridionalis	97.27	1.00e-141	494.00
IUUC-Oni-082435	Oryza nivara	98.82	9.00e-143	498.00
IUUC-Opu-083140	Oryza punctata	96.11	7.00e-131	459.00
IUUC-Oru-084727	Oryza rufipogon	98.82	5.00e-135	472.00
IUUC-Osa-085427	Oryza sativa	99.61	9.00e-136	474.00
IUUC-Sit-110756	Setaria italica	73.91	2.00e-91	327.00
IUUC-Sly-111171	Solanum lycopersicum	40.17	6.00e-35	140.00
IUUC-Stu-112652	Solanum tuberosum	41.28	1.00e-35	142.00
IUUC-Sbi-114443	Sorghum bicolor	73.60	3.00e-102	363.00
IUUC-Tae-124466	Triticum aestivum	75.98	7.00e-99	352.00
IUUC-Tur-126471	Triticum urartu	73.90	1.00e-92	331.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence