iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114094

Ensembl Protein ID

Sb06g026820.1

UniProt Accession

C5YEP3; C5YEP3_SORBI

Genbank Protein ID

EES11337.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G195700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g026820	Sb06g026820.1	Sb06g026820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-22	79.8	115	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH d+v c++f s+   ++sGs D t+ +WD 
   Q: 115  GHLDRVVCISFcSEkENFLSGSLDRTVLLWDQ 146
           8**********988888**************5 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTSPPRVSME ITDDMLKSME VGLAFRDYNG RISSMDFHSK ATSYLVTASD DESIRLYDTQ 60
NAVCLKTINS KKYGVELVCF TDNPTIVLYS SKNGWDESLR LLSLNDNRFL RYFKGHLDRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGAAGTT GGCGAAGCTG AGAGAGAGGT AAGCTGGACT AAAAAATTGC CTTTGCCCGC 60
ACGCCCCTTT GGCCCACCGC CTGGACTCGT CTCGCCCGCG GGCGATCTCC TCCATCCGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0048188--C:Set1C/COMPASS complex
GO:0003682--F:chromatin binding
GO:0080182--P:histone H3-K4 trimethylation

KEGG

sbi:SORBI_06g026820

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000390	Aegilops tauschii	87.62	5.00e-172	595.00
IUUC-Aml-001221	Ailuropoda melanoleuca	37.70	7.00e-57	213.00
IUUC-Atr-002607	Amborella trichopoda	72.96	3.00e-140	490.00
IUUC-Apl-003817	Anas platyrhynchos	38.83	1.00e-55	209.00
IUUC-Aca-005383	Anolis carolinensis	37.97	4.00e-56	210.00
IUUC-Aly-005462	Arabidopsis lyrata	67.18	1.00e-130	457.00
IUUC-Ath-006609	Arabidopsis thaliana	66.56	1.00e-129	454.00
IUUC-Ame-010661	Astyanax mexicanus	39.03	4.00e-55	208.00
IUUC-Bta-013022	Bos taurus	36.96	3.00e-54	205.00
IUUC-Bdi-014222	Brachypodium distachyon	87.27	2.00e-173	600.00
IUUC-Bol-015485	Brassica oleracea	66.46	5.00e-130	456.00
IUUC-Bra-016914	Brassica rapa	66.77	1.00e-130	458.00
IUUC-Cel-018276	Caenorhabditis elegans	29.35	2.00e-41	161.00
IUUC-Cja-019309	Callithrix jacchus	37.70	7.00e-57	213.00
IUUC-Cfa-020345	Canis familiaris	37.70	7.00e-57	213.00
IUUC-Cpo-022227	Cavia porcellus	34.08	4.00e-45	174.00
IUUC-Csa-023267	Chlorocebus sabaeus	38.17	3.00e-57	214.00
IUUC-Cho-024409	Choloepus hoffmanni	35.53	5.00e-42	163.00
IUUC-Cin-025628	Ciona intestinalis	37.93	6.00e-62	229.00
IUUC-Csv-026164	Ciona savignyi	37.97	3.00e-63	234.00
IUUC-Dre-028001	Danio rerio	38.98	2.00e-58	218.00
IUUC-Dno-029056	Dasypus novemcinctus	37.70	7.00e-57	213.00
IUUC-Dor-031078	Dipodomys ordii	35.15	5.00e-34	136.00
IUUC-Dme-032085	Drosophila melanogaster	35.67	7.00e-60	223.00
IUUC-Ete-033158	Echinops telfairi	37.70	7.00e-58	216.00
IUUC-Eca-033879	Equus caballus	36.94	3.00e-47	182.00
IUUC-Eeu-035229	Erinaceus europaeus	32.68	7.00e-41	159.00
IUUC-Fca-035896	Felis catus	37.70	7.00e-57	213.00
IUUC-Fal-036843	Ficedula albicollis	38.83	1.00e-55	210.00
IUUC-Gmo-038506	Gadus morhua	38.76	1.00e-54	206.00
IUUC-Gga-040192	Gallus gallus	38.61	4.00e-58	217.00
IUUC-Gac-041551	Gasterosteus aculeatus	34.73	4.00e-53	200.00
IUUC-Gma-044060	Glycine max	72.27	2.00e-140	490.00
IUUC-Ggo-045204	Gorilla gorilla	37.91	3.00e-54	205.00
IUUC-Hsa-045866	Homo sapiens	37.70	7.00e-57	213.00
IUUC-Hvu-047690	Hordeum vulgare	86.69	2.00e-170	590.00
IUUC-Itr-048338	Ictidomys tridecemlineatus	37.70	7.00e-57	213.00
IUUC-Lch-050431	Latimeria chalumnae	38.11	3.00e-55	208.00
IUUC-Lpe-050812	Leersia perrieri	87.58	2.00e-170	590.00
IUUC-Mcc-055583	Macaca mulatta	37.70	7.00e-57	213.00
IUUC-Meu-056113	Macropus eugenii	32.28	2.00e-38	151.00
IUUC-Mtr-058607	Medicago truncatula	70.77	7.00e-137	479.00
IUUC-Mga-059407	Meleagris gallopavo	39.38	1.00e-50	192.00
IUUC-Mvi-060411	Microbotryum violaceum	31.23	4.00e-46	177.00
IUUC-Mmr-061470	Microcebus murinus	37.70	7.00e-57	213.00
IUUC-Mdo-062860	Monodelphis domestica	38.29	7.00e-57	213.00
IUUC-Mmu-063105	Mus musculus	37.70	7.00e-57	213.00
IUUC-Mac-064497	Musa acuminata	78.37	1.00e-151	528.00
IUUC-Mpu-066472	Mustela putorius furo	38.28	8.00e-50	189.00
IUUC-Mlu-067073	Myotis lucifugus	37.46	1.00e-54	205.00
IUUC-Ncr-068702	Neurospora crassa	29.87	4.00e-28	118.00
IUUC-Nle-069451	Nomascus leucogenys	37.70	7.00e-57	213.00
IUUC-Opr-071112	Ochotona princeps	38.28	8.00e-50	189.00
IUUC-Ont-071988	Oreochromis niloticus	38.56	4.00e-56	211.00
IUUC-Oan-072947	Ornithorhynchus anatinus	39.00	1.00e-49	188.00
IUUC-Ocu-074969	Oryctolagus cuniculus	37.70	7.00e-57	213.00
IUUC-Oba-075229	Oryza barthii	87.85	4.00e-171	593.00
IUUC-Obr-076490	Oryza brachyantha	87.54	1.00e-170	591.00
IUUC-Ogl-077381	Oryza glaberrima	87.89	9.00e-170	588.00
IUUC-Ogu-078068	Oryza glumaepatula	88.12	8.00e-171	591.00
IUUC-Oin-079415	Oryza indica	88.16	8.00e-171	592.00
IUUC-Olo-080773	Oryza longistaminata	77.19	2.00e-144	503.00
IUUC-Ome-081277	Oryza meridionalis	75.08	1.00e-135	474.00
IUUC-Oni-082990	Oryza nivara	88.16	2.00e-171	594.00
IUUC-Opu-083374	Oryza punctata	87.85	6.00e-172	595.00
IUUC-Oru-084354	Oryza rufipogon	88.16	2.00e-171	594.00
IUUC-Osa-086154	Oryza sativa	88.16	3.00e-171	593.00
IUUC-Ola-087095	Oryzias latipes	38.34	2.00e-58	218.00
IUUC-Olu-087603	Ostreococcus lucimarinus	34.64	4.00e-47	181.00
IUUC-Oga-088766	Otolemur garnettii	37.70	7.00e-57	213.00
IUUC-Oar-089565	Ovis aries	37.38	1.00e-54	205.00
IUUC-Ptr-091219	Pan troglodytes	37.06	1.00e-57	215.00
IUUC-Pan-091733	Papio anubis	37.70	7.00e-57	213.00
IUUC-Psi-092972	Pelodiscus sinensis	38.71	8.00e-54	204.00
IUUC-Pma-094332	Petromyzon marinus	36.10	2.00e-59	221.00
IUUC-Ppa-095546	Physcomitrella patens	56.33	2.00e-100	357.00
IUUC-Pfo-096775	Poecilia formosa	38.56	7.00e-56	211.00
IUUC-Pab-098340	Pongo abelii	37.06	9.00e-58	216.00
IUUC-Pop-099278	Populus trichocarpa	73.29	4.00e-136	476.00
IUUC-Pca-100635	Procavia capensis	37.50	3.00e-47	181.00
IUUC-Ppe-101860	Prunus persica	75.63	8.00e-145	505.00
IUUC-Pva-102798	Pteropus vampyrus	37.70	1.00e-56	212.00
IUUC-Pgr-103395	Puccinia graminis	32.51	4.00e-45	174.00
IUUC-Ptt-103747	Puccinia triticina	32.18	1.00e-42	166.00
IUUC-Rno-106127	Rattus norvegicus	36.94	1.00e-51	195.00
IUUC-Sha-107529	Sarcophilus harrisii	36.74	7.00e-53	199.00
IUUC-Sit-110657	Setaria italica	96.64	0.00e+00	660.00
IUUC-Sly-110867	Solanum lycopersicum	72.73	3.00e-141	493.00
IUUC-Sar-113079	Sorex araneus	38.28	8.00e-50	189.00
IUUC-Ssc-116386	Sus scrofa	37.70	7.00e-57	213.00
IUUC-Tgu-116465	Taeniopygia guttata	39.53	8.00e-47	180.00
IUUC-Tru-117604	Takifugu rubripes	37.91	4.00e-55	208.00
IUUC-Tsy-119314	Tarsius syrichta	28.11	1.00e-26	112.00
IUUC-Tni-120237	Tetraodon nigroviridis	37.91	2.00e-53	202.00
IUUC-Tca-121499	Theobroma cacao	68.98	1.00e-140	493.00
IUUC-Tre-122205	Trichoderma reesei	31.61	2.00e-35	142.00
IUUC-Tae-124779	Triticum aestivum	87.62	5.00e-172	595.00
IUUC-Tur-126512	Triticum urartu	87.64	3.00e-146	510.00
IUUC-Ttr-128307	Tursiops truncatus	38.28	8.00e-50	189.00
IUUC-Uma-129579	Ustilago maydis	28.98	1.00e-37	149.00
IUUC-Vpa-130091	Vicugna pacos	38.28	8.00e-50	189.00
IUUC-Vvi-131040	Vitis vinifera	73.35	4.00e-144	503.00
IUUC-Xtr-132660	Xenopus tropicalis	38.83	9.00e-56	210.00
IUUC-Xma-133496	Xiphophorus maculatus	38.34	2.00e-58	218.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence