iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114769

Ensembl Protein ID

Sb06g027390.1

UniProt Accession

C5XJE3; C5XJE3_SORBI

Genbank Protein ID

EES02145.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G444100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g027390	Sb06g027390.1	Sb06g027390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-12	45.9	39	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGs..dDgtikvWDlrtgvll 36
           gH + v +la+   +++ll+sG+  dD  ik W+++tg +l
   Q: 39   GHLSAVKALAWcsfQSNLLASGGggDDRCIKFWNTHTGACL 79
           8***********98559****5555*************997 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDGKIMNNDV RIRNNAVQTY HGHEQETAGH TQWLHRLQGH LSAVKALAWC SFQSNLLASG 60
GGGDDRCIKF WNTHTGACLN SVDTGSQNKN ERELLSSHGF TQNQLILWKY PSMVKLAELN 120

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Nucleotide Sequence
(Fasta)

ATGGACGGCA AGATCATGAA CAATGATGTG AGGATCAGGA ACAATGCTGT ACAGACATAC 60
CATGGGCATG AGCAGGAGGT GTGTGGGCTC AGATGGTCAG GATCAGGGTA GCAACTGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033010--Cdc20/Fizzy
IPR013979--TIF_beta_prop-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08662--eIF2A

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

sbi:SORBI_03g047370

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence