iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114304

UUCD1 version

UUC-SoB-00913

Ensembl Protein ID

Sb07g004220.1

UniProt Accession

A0A1B6PQ83; A0A1B6PQ83_SORBI

Genbank Protein ID

KXG27830.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G051000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g004220	Sb07g004220.1	Sb07g004220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-07	32.1	55	111
E3 activity/RING/RING	1.70e-08	35.6	59	100

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPn 58
           + f+C I l++ ++Pvv+p+G+ +   ++ +wl   s+ ++cPv++ ++ e d++P 
   Q: 55   SSFMCNICLDVAKEPVVTPCGHLFCWPCLYQWLhaHSSYNECPVCKGEVLEGDITPI 111
           68*******************************76444447************9997 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+  k+ p+v+pCgH+f+  Cl++w ++    s    CP+C+
   Q: 59   CNICLDVAKE-PVVTPCGHLFCWPCLYQW-LHA--HSSYNECPVCK 100
           99******99.999***************.444..455555****6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAGKEATEGS RRTTLMMPNL TDATLEASRI GKLKESLASE VVGESEKDGS CGCNSSFMCN 60
ICLDVAKEPV VTPCGHLFCW PCLYQWLHAH SSYNECPVCK GEVLEGDITP IYGRGSEGES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGGCA AGGAGGCTAC AGAGGGTAGT AGGAGGACGA CATTGATGAT GCCCAACTTG 60
ACTGATGCTA CGCTGGAAGC CTCAAGAATA GGCAAGCTGA AGGAATCACT TGCCTCAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Loc-052118	Lepisosteus oculatus	54.55	4.00e-20	90.10
IUUC-Opr-070197	Ochotona princeps	54.55	4.00e-20	90.10
IUUC-Ola-086800	Oryzias latipes	54.55	4.00e-20	90.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence