iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078312

Ensembl Protein ID

OGLUM08G04890.1

UniProt Accession

A0A0E0ARI1; A0A0E0ARI1_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM08G04890	OGLUM08G04890.1	OGLUM08G04890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.80e-35	118.5	107	143
UBD/Beta-Prp	2.00e-46	159.7	13	179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H ++v  +a+ +  +llvsGs+D+t++ WD+r+ +++
   Q: 107  HDAPVKEIAWiPQmNLLVSGSWDKTLRYWDTRQSNPV 143
           89999******777****************9998776 PP

UBD/Beta-Prp

   S: 126  gqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtln 219
           ++ +e +l +  ++v++++++p++nllv+ s D++vr W +  g+   + +  h+++v + +++++g+ + sg++d++vk+w l +g   +t+ 
   Q: 13   NKSFE-VLPNPGDSVSSLSFSPKSNLLVATSWDNQVRCWEIVGGSSQPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAQTVA 105
           56666.777777899**************************999999999888***************************************** PP
   S: 220  ghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkkn 297
            h+++vk ++  p+ ++lvsgs D+++r Wd+r+++++++ ql++     + +l ++++ ++ g++d ++ +++l++ 
   Q: 106  MHDAPVKEIAWIPQMNLLVSGSWDKTLRYWDTRQSNPVHVQQLPE----RCYALTVNYPLMIVGTADRNLVVFNLQNP 179
           *******************************************99....66666889*****************9875 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MATLGLAPNM NPNKSFEVLP NPGDSVSSLS FSPKSNLLVA TSWDNQVRCW EIVGGSSQPK 60
ASISHDQPVL CSAWKDDGTT VFSGGCDKQV KMWPLLSGGQ AQTVAMHDAP VKEIAWIPQM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACGC TTGGTCTTGC CCCAAACATG AATCCAAACA AGTCATTTGA GGTGTGATGC 60
TTTATGCAAC AATTGTCCTC CTTTTCTATC TGTGCTTGTG TTGGTCCTCA CATTCTGTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR002885--Pentatricopeptide_repeat
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS51375--PPR
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF01535--PPR
PF13041--PPR_2
PF13812--PPR_3
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000293	Aegilops tauschii	81.63	5.00e-156	543.00
IUUC-Bdi-015050	Brachypodium distachyon	84.71	5.00e-158	549.00
IUUC-Hvu-047380	Hordeum vulgare	85.32	2.00e-159	554.00
IUUC-Lpe-051050	Leersia perrieri	91.72	1.00e-179	621.00
IUUC-Oba-075879	Oryza barthii	92.02	1.00e-179	622.00
IUUC-Obr-076326	Oryza brachyantha	90.18	3.00e-178	617.00
IUUC-Ogl-077767	Oryza glaberrima	92.02	1.00e-180	624.00
IUUC-Oin-080219	Oryza indica	92.02	1.00e-180	624.00
IUUC-Olo-081007	Oryza longistaminata	92.02	1.00e-180	624.00
IUUC-Oni-082844	Oryza nivara	92.02	1.00e-180	624.00
IUUC-Opu-083511	Oryza punctata	86.00	3.00e-177	613.00
IUUC-Oru-085012	Oryza rufipogon	92.02	1.00e-180	624.00
IUUC-Osa-085287	Oryza sativa	92.02	1.00e-180	624.00
IUUC-Sit-110521	Setaria italica	88.99	3.00e-174	603.00
IUUC-Sbi-113852	Sorghum bicolor	88.07	3.00e-173	600.00
IUUC-Tae-124794	Triticum aestivum	85.63	3.00e-159	553.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence