iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058640

Ensembl Protein ID

KEH25277

UniProt Accession

A0A072U6H8; A0A072U6H8_MEDTR

Genbank Protein ID

KEH25277.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein, putative

Genbank Nucleotide ID

CM001222

Gene Name

MTR_6g016895

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_6g016895	KEH25278	KEH25278
MTR_6g016895	KEH25277	KEH25277

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-06	30.1	314	359

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgpl.vlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC++df+  ++ +l CgH f+++C+q w++  +   k  +CPlC+
   Q: 314  CVICWTDFSS-TRgILECGHRFCFSCIQGWVDCRKAMGKVSNCPLCK 359
           ********76.443799*****************************7 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MDRVVATVSG YRELERFNLI KLISRSGASY VGDMSKSITH LVCWKFEGKK YDIARKLKIY 60
VVNHRWVEDC IKEGRRVPED SYTLQSGQEV GPLVMEVPVN VQASTLSKNK VVRGRSCDIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCGGG TGGTTGCAAC AGTGAGTGGT TACCGTGAAC TCGAGCGATT CAATCTTATT 60
AAGCTCATTT CGCGTTCCGG TGCCAGTTAC GTTGGAGATA TGTCGAAGTC AATTACGCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001357--BRCT_dom
IPR011011--Znf_FYVE_PHD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50172--BRCT
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF12738--PTCB-BRCT
PF13639--zf-RING_2

SMART

SM00292--BRCT
SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000133	Aegilops tauschii	59.48	9.00e-51	194.00
IUUC-Atr-003095	Amborella trichopoda	32.31	2.00e-55	209.00
IUUC-Aly-006322	Arabidopsis lyrata	39.12	4.00e-87	314.00
IUUC-Ath-006604	Arabidopsis thaliana	39.29	1.00e-83	302.00
IUUC-Bdi-014816	Brachypodium distachyon	41.19	8.00e-55	207.00
IUUC-Bol-016032	Brassica oleracea	41.93	2.00e-86	312.00
IUUC-Bra-016767	Brassica rapa	42.05	3.00e-85	308.00
IUUC-Gma-043447	Glycine max	66.52	6.00e-167	579.00
IUUC-Lpe-050685	Leersia perrieri	46.07	2.00e-35	143.00
IUUC-Mac-065152	Musa acuminata	37.93	2.00e-85	308.00
IUUC-Oba-075202	Oryza barthii	62.25	2.00e-51	196.00
IUUC-Obr-076294	Oryza brachyantha	60.93	3.00e-51	195.00
IUUC-Ogl-077543	Oryza glaberrima	62.25	2.00e-51	196.00
IUUC-Oin-079950	Oryza indica	62.25	2.00e-51	197.00
IUUC-Olo-080275	Oryza longistaminata	61.59	6.00e-51	194.00
IUUC-Ome-081398	Oryza meridionalis	62.25	7.00e-52	197.00
IUUC-Oru-084583	Oryza rufipogon	49.04	4.00e-35	141.00
IUUC-Osa-086181	Oryza sativa	60.25	3.00e-51	195.00
IUUC-Pop-099757	Populus trichocarpa	44.19	4.00e-100	357.00
IUUC-Ppe-101454	Prunus persica	44.68	2.00e-97	348.00
IUUC-Smo-109143	Selaginella moellendorffii	52.13	9.00e-29	120.00
IUUC-Sit-110027	Setaria italica	40.67	4.00e-86	311.00
IUUC-Sly-111644	Solanum lycopersicum	40.55	3.00e-87	315.00
IUUC-Stu-112802	Solanum tuberosum	38.93	8.00e-88	317.00
IUUC-Sbi-114201	Sorghum bicolor	39.20	6.00e-87	313.00
IUUC-Tca-121547	Theobroma cacao	38.72	3.00e-90	325.00
IUUC-Tae-124541	Triticum aestivum	59.35	4.00e-52	198.00
IUUC-Tur-126024	Triticum urartu	61.11	7.00e-32	131.00
IUUC-Vvi-131693	Vitis vinifera	45.59	5.00e-100	357.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence