iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005717

Ensembl Protein ID

fgenesh1_pm.C_scaffold_7001632

UniProt Accession

D7ME75; D7ME75_ARALL

Genbank Protein ID

EFH44046.1

Protein Name

DNA binding protein

Genbank Nucleotide ID

GL348719

Gene Name

EBS; ARALYDRAFT_329405

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_7001632	fgenesh1_pm.C_scaffold_7001632	fgenesh1_pm.C_scaffold_7001632

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	7.00e-09	36.4	148	196

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +v+Ce C++w+HpaC+++++ee ++ ++ + C +C+s
   Q: 148  YC-KCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH-FVCAECSS 196
           78.7*****************************888888887.******86 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAKTRPGVAS KIKPGRKELD SYTIKGTNKV VRAGDCVLMR PSDAGKPPYV ARVEKIEADA 60
RNNVKVHCRW YYRPEESLGG RRQFHGAKEL FLSDHFDVQS AHTIEGKCIV HTFKNYTRLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAAAA CTCGACCTGG TGTCGCCTCC AAAATTAAGC CTGGTAGGAA GGAGCTGGAC 60
TCTTATACCA TCAAGGGCAC AAACAAAGTT GTGAGAGGTA GTCTTTATAT TATCCTTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006325--P:chromatin organization
GO:0035067--P:negative regulation of histone acetylation
GO:0048579--P:negative regulation of long-day photoperiodism, flowering
GO:0006355--P:regulation of transcription, DNA-templated
GO:0009845--P:seed germination

KEGG

aly:ARALYDRAFT_329405

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002986	Amborella trichopoda	82.21	2.00e-106	377.00
IUUC-Ath-007631	Arabidopsis thaliana	97.86	5.00e-138	482.00
IUUC-Ate-010345	Aspergillus terreus	39.47	4.00e-04	40.40
IUUC-Bgr-012210	Blumeria graminis	49.09	5.00e-09	55.10
IUUC-Bdi-014153	Brachypodium distachyon	74.61	2.00e-91	327.00
IUUC-Bol-016238	Brassica oleracea	98.16	7.00e-128	448.00
IUUC-Bra-018028	Brassica rapa	88.98	5.00e-128	449.00
IUUC-Cre-022934	Chlamydomonas reinhardtii	45.36	2.00e-44	171.00
IUUC-Fso-038446	Fusarium solani	38.89	5.00e-06	44.70
IUUC-Gma-043039	Glycine max	86.54	2.00e-110	390.00
IUUC-Lpe-051400	Leersia perrieri	74.52	4.00e-94	336.00
IUUC-Mtr-057710	Medicago truncatula	86.06	3.00e-105	373.00
IUUC-Mla-058837	Melampsora laricipopulina	41.67	3.00e-06	46.20
IUUC-Mac-064749	Musa acuminata	79.81	3.00e-100	356.00
IUUC-Oba-075188	Oryza barthii	72.14	1.00e-91	328.00
IUUC-Obr-076844	Oryza brachyantha	72.64	3.00e-92	330.00
IUUC-Ogl-077260	Oryza glaberrima	72.14	9.00e-92	328.00
IUUC-Ogu-078663	Oryza glumaepatula	76.68	3.00e-93	333.00
IUUC-Oin-079894	Oryza indica	76.17	4.00e-93	333.00
IUUC-Olo-080411	Oryza longistaminata	76.17	4.00e-93	333.00
IUUC-Ome-081623	Oryza meridionalis	76.17	2.00e-92	330.00
IUUC-Oni-082587	Oryza nivara	76.17	4.00e-93	333.00
IUUC-Opu-083591	Oryza punctata	74.52	3.00e-97	346.00
IUUC-Oru-084597	Oryza rufipogon	75.65	2.00e-92	330.00
IUUC-Osa-086057	Oryza sativa	76.17	4.00e-93	333.00
IUUC-Pno-094853	Phaeosphaeria nodorum	34.62	1.00e-05	44.70
IUUC-Pop-098948	Populus trichocarpa	84.40	3.00e-112	396.00
IUUC-Ppe-101639	Prunus persica	83.17	4.00e-107	379.00
IUUC-Pgr-103292	Puccinia graminis	33.96	1.00e-05	43.90
IUUC-Ptt-103983	Puccinia triticina	35.85	2.00e-06	46.20
IUUC-Pte-104158	Pyrenophora teres	36.54	4.00e-05	42.70
IUUC-Pyt-104466	Pyrenophora triticirepentis	36.54	3.00e-05	42.70
IUUC-Smo-109649	Selaginella moellendorffii	71.28	1.00e-86	311.00
IUUC-Sit-110411	Setaria italica	73.56	5.00e-97	345.00
IUUC-Sly-111450	Solanum lycopersicum	79.33	3.00e-103	366.00
IUUC-Stu-112123	Solanum tuberosum	74.47	7.00e-108	382.00
IUUC-Sbi-114186	Sorghum bicolor	71.63	2.00e-94	337.00
IUUC-Sre-115140	Sporisorium reilianum	51.02	9.00e-09	55.50
IUUC-Tca-121596	Theobroma cacao	88.02	2.00e-115	407.00
IUUC-Tae-122704	Triticum aestivum	76.68	7.00e-91	325.00
IUUC-Tur-126461	Triticum urartu	61.66	2.00e-69	254.00
IUUC-Vvi-131614	Vitis vinifera	85.78	1.00e-108	384.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence