iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114149

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G028900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g002550	Sb08g002550.1	Sb08g002550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-07	33.1	113	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC++d+       + lpCgH++h +C+  w         + +CP+Cr
   Q: 113  CAICKDDLplaA-AARRLPCGHLYHSSCIVPW------LEVHNSCPICR 154
           ******997743.3667***************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSDTSSSPPP EQVLLLPTDR SSSSSSSDDS HDGDDDSDLV IAIATHRQTY GEEEEAGQRR 60
RAGRGRSPIM AMPPAPALFA PWVVVRGGGV TPAPAASIEA LPTVEVSEPG AVCAICKDDL 120

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Nucleotide Sequence
(Fasta)

ATGTCCGACA CGTCGTCGTC GCCTCCGCCG GAGCAGGTGT TGCTGCTGCC GACTGACCGG 60
TCCTCGTCCT CGTCGTCCTC GGACGACAGC CACGACGGCG ACGACGACAG TGACCTCGTC 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_08g002550

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007863	Ashbya gossypii	57.14	2.00e-08	53.10
IUUC-Mac-065502	Musa acuminata	62.20	5.00e-24	103.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence