iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114625

UUCD1 version

UUC-SoB-01221

Ensembl Protein ID

Sb08g010420.1

UniProt Accession

A0A1B6PCE4; A0A1B6PCE4_SORBI

Genbank Protein ID

KXG23376.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G089100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g010420	Sb08g010420.1	Sb08g010420.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.60e-23	81.9	24	100

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++e flCp+++++M+dPv + sG+t++r +I k+++++ +      cPvt+ +l++++l P+++lr++i++w+++n+
   Q: 24   IYESFLCPLTKQVMQDPVSIDSGVTFERDAILKYFNECLSsgkrlVCPVTKMELSNTELNPSIALRNTIDEWMNRNE 100
           799*******************************95544444469*****************************997 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAEVQDGHYD STSQSTDSLR VEPIYESFLC PLTKQVMQDP VSIDSGVTFE RDAILKYFNE 60
CLSSGKRLVC PVTKMELSNT ELNPSIALRN TIDEWMNRNE AAKLDVARKS LTSDSMESDI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGAAG TTCAGGATGG CCATTATGAT TCAACATCAC AGTCCACTGA CAGCTTGCGT 60
GTTGAGCCTA TATATGAGTC GTTCCTATGC CCGCTTACCA AACAGGTTAT GCAGGATCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR021133--HEAT_type_2
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50077--HEAT_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence