iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA04G07850	GLYMA04G07850.4	GLYMA04G07850.4
GLYMA04G07850	GLYMA04G07850.7	GLYMA04G07850.7
GLYMA04G07850	GLYMA04G07850.10	GLYMA04G07850.10

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.00e-69	236.0	108	448

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEf 95
           Gl+Nlg+tCY N++LQcL++ +++re +++ ++  l       ++ ++l++l++lf +l  sk   ++ + ++k+l+      ++  qqD++Ef
   Q: 108  GLTNLGATCYANCILQCLYMNKSFREGMFSVERDVL-------QQHPVLDQLARLFVQLHISKMAFIDSSPFVKTLEL-----DNGVQQDSHEF 189
           9*****************************333333.......3468*****************************95.....5567******* PP
   S: 96   laflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvs...sreepfldlslpvpgkeetkkes 186
           l+ ll+ le+ l                       + +k  k +++++dlF+g++++ ++c +c++ s   s+ e+f++l+l+v+g +     s
   Q: 190  LTLLLSLLERCL-----------------------SHSKVPKATTIVQDLFRGSVSHVTTCSQCGRDSeasSKMEDFYELELNVKGLK-----S 255
           ************.......................457889999********************988766699***************.....9 PP
   S: 187  lqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeL 280
           l+++L+++ ++eel+g+n+y+ce+ck +++a++++kl +lP+vL ++LkR+ f  ++  ++k+++ ++fp eLd+++ +++ ++    +  Y+L
   Q: 256  LDESLDEYLTAEELNGDNQYFCESCKTRVDATRSIKLCTLPKVLNFQLKRYVFLPKTTTKKKVTSAFSFPAELDMRHRMSELSQF---NLVYDL 346
           ****************************************************************************988885544...89**** PP
   S: 281  iavvvHsG.slssGHYvayvkn.ekgkWllfdDskVtevkeeevleetg............................................s 328
           +av++H+G +++sGHY+a++k+ ++g+W++fdD++Vt +  + + ee++                                            s
   Q: 347  SAVLIHKGtGANSGHYIAHIKDvNTGQWWEFDDEHVTNLGFHPFGEESSssttksiktdaihsdnseamvadsngnglnathslssqvetflsS 440
           **********************77778********99998777777666777789999999999999999999999999999999999999999 PP
   S: 329  taYvlfYk 336
           +aY+l+Y+
   Q: 441  DAYMLMYH 448
           9****996 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSRPTTRSKN KRQKQGDDGN GTSEIWRKIH NTGVVSKDDM NQLYMIWKPV CSGCRVNTKD 60
NPNCFCALVP PPNGARKSGL WQKMSDVVES LGHDPTKDLR ASADSPAGLT NLGATCYANC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGAGTCCT CTGACTCAAA AACTTTACCC ATCCATTCCC CCCTTCTTAG TTCTGAGTTC 60
TGACATGACA TTCCCATCCA AACCCAACAA AGTTCTGTCC CCTCTCTCTC TCTCAGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006615--Pept_C19_DUSP
IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR033841--USP48
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS51283--DUSP
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

SMART

SM00695--DUSP

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

gmx:100782778

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000130	Aegilops tauschii	55.89	0.00e+00	1125.00
IUUC-Csa-023931	Chlorocebus sabaeus	27.64	5.00e-91	329.00
IUUC-Mtr-058762	Medicago truncatula	84.27	0.00e+00	1811.00
IUUC-Ogl-077339	Oryza glaberrima	71.61	4.00e-125	441.00
IUUC-Osa-086221	Oryza sativa	71.61	4.00e-125	441.00
IUUC-Ppa-095808	Physcomitrella patens	45.54	0.00e+00	838.00
IUUC-Sit-110683	Setaria italica	57.50	0.00e+00	1151.00
IUUC-Sbi-113833	Sorghum bicolor	71.57	1.00e-112	399.00
IUUC-Ttr-128312	Tursiops truncatus	26.86	5.00e-86	312.00
IUUC-Vpa-130348	Vicugna pacos	26.68	3.00e-85	310.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence