iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000052388.6	ENSDART00000086211.6	ENSDARP00000080646.4
ENSDARG00000052388.6	ENSDART00000152750.1	ENSDARP00000127000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/RAWUL	1.60e-29	103.2	135	226

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/RAWUL

   S: 1    islsLeplesnkakddsk...lkkkylrcsarltVkhlkkflaeklklsssyevdllcedevLednetLeeikyifiwk....kegpLv 82
           i+++L++l+ n++ +++    l+kk++rcs+r+tV+++kkfl++klkl+ssye+d+lc++e++++++t+e+i y+++w+    + +p+v
   Q: 135  IAICLDCLRINGQMGENIvkgLMKKFIRCSTRVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGKDHTMEFI-YMTRWRlrgeNVYPMV 222
           79*************88899****************************************************.*******99999**** PP
   S: 83   LqYr 86
           L+Yr
   Q: 223  LEYR 226
           ***9 PP

Organism

Danio rerio

Functional Description
(View)

Component of Polycomb group (PcG) multiprotein complexes; the complex class is required to maintain the transcriptionally repressive state of some genes.

Protein Sequence
(Fasta)

MTSHRKHLVR DFNHFITCFV CKGYLIKPTT VTECLHTFCK SCIVQHFEDS NDCPKCGIQV 60
HETNPLEMLR LDNTLEEVIF KLVPGLREKE QQQEDEFWRR KESNDENGPM CKKRRVDEED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACCACTCTC ATGTTTTTAA TGCAAACTGA CATGATCGGA CAAGTCCTAT AACAGCCTAT 60
TAGCAGGTAC CTGCAATAAG GCCATATTAA CAAATCCTCC TGTTTGACAG GCCTTCCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR032443--RAWUL
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF16207--RAWUL

SMART

SM00184--RING

Gene Ontology

GO:0031519--C:PcG protein complex
GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

dre:692252

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cho-025053	Choloepus hoffmanni	84.06	3.00e-32	131.00
IUUC-Dor-030893	Dipodomys ordii	71.56	7.00e-75	273.00
IUUC-Eeu-034466	Erinaceus europaeus	64.17	2.00e-74	272.00
IUUC-Gmo-038871	Gadus morhua	70.97	9.00e-83	299.00
IUUC-Gga-040926	Gallus gallus	74.22	5.00e-95	340.00
IUUC-Gac-042006	Gasterosteus aculeatus	73.41	6.00e-91	327.00
IUUC-Loc-052649	Lepisosteus oculatus	79.69	1.00e-104	372.00
IUUC-Meu-056663	Macropus eugenii	63.53	3.00e-74	271.00
IUUC-Mga-059573	Meleagris gallopavo	74.41	3.00e-94	337.00
IUUC-Oan-073482	Ornithorhynchus anatinus	68.61	5.00e-73	267.00
IUUC-Ola-086999	Oryzias latipes	72.44	7.00e-95	340.00
IUUC-Rno-105427	Rattus norvegicus	78.73	1.00e-84	306.00
IUUC-Sbi-114697	Sorghum bicolor	40.96	5.00e-11	62.40
IUUC-Ssc-116448	Sus scrofa	64.93	3.00e-60	224.00
IUUC-Tbe-127914	Tupaia belangeri	62.65	5.00e-75	274.00
IUUC-Xtr-131995	Xenopus tropicalis	79.09	7.00e-89	320.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence