iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058756

Ensembl Protein ID

KEH27147

UniProt Accession

A0A072UBZ5; A0A072UBZ5_MEDTR

Genbank Protein ID

KEH27147.1

Protein Name

Auxin-induced protein

Genbank Nucleotide ID

CM001222

Gene Name

MTR_6g488150

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_6g488150	KEH27147	KEH27147
MTR_6g488150	KEH27148	KEH27148

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	7.10e-16	59.6	137	235

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 4    vkvsykgeirsfaldlekpgkfedLlkavrt.lt.........................elknsevalkYeDedGDlvtlksDedldkavsllaskksllr 78
           vkvs++g+++++++dl+  g++++L +a+++ +                           l +se+ l+YeD+dGD++ l++D++++++++      s++r
   Q: 137  VKVSMDGAPYLRKVDLKIFGTYKELSSALEKmFScftisqfgshgvfgqgnvcesrlmdLLHGSEYVLTYEDKDGDWM-LVGDVPWKMFID------SCKR 230
           9******************************72256799*******************99999***************.************......**** PP
   S: 79   lliqk 83
           l+i+k
   Q: 231  LRIMK 235
           ***97 PP

Organism

Medicago truncatula

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MESSEIFSQR SNNGLNLKAT ELRLGLPGSE SPERDNDLLE EKNAYSLCML NSLFSGAKRG 60
FSDAIDMRKS SNQQGSVAKD QTNPLNEKKK SQISGSAAKE QVVGWPPIRS FRKNSMATQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACTTACAAT GATATGCCAT TGCTATCAAT GTTTAACAGA AGACAGTGAT TTTTTCAGTT 60
TATATAGAAA CAAAACAAAC TGAACACAAA CCTCAGACAG AACCTTCTCT ATTCATCAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

mtr:MTR_6g488150

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ete-032413	Echinops telfairi	43.33	2.40e+00	27.30
IUUC-Gma-042909	Glycine max	63.93	2.00e-90	325.00
IUUC-Mac-064563	Musa acuminata	61.99	1.00e-81	295.00
IUUC-Ncr-068819	Neurospora crassa	28.05	2.60e+00	27.30
IUUC-Opu-083799	Oryza punctata	50.00	9.00e-52	196.00
IUUC-Sly-111221	Solanum lycopersicum	52.31	1.00e-70	259.00
IUUC-Sbi-114334	Sorghum bicolor	54.58	9.00e-60	222.00
IUUC-Tca-121602	Theobroma cacao	59.31	6.00e-87	313.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence