iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114833

UUCD1 version

UUC-SoB-01327

Ensembl Protein ID

Sb09g018080.1

UniProt Accession

A0A1B6P7V6; A0A1B6P7V6_SORBI

Genbank Protein ID

KXG21827.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G112800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g018080	Sb09g018080.1	Sb09g018080.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.50e-08	33.1	750	784

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgv 34
           H+  vtc+a+  ++  l+sGs D++i+vW++ + +
   Q: 750  HKKAVTCFALseTGENLLSGSADKSIRVWEMAQRK 784
           8999******8655779*************87655 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MLQESQSDSP VSFYSHLDSS EESDSEAAPY DKGRSAKIMP IDADFLAAKL HERSNHNKNL 60
TWCTSPENAM IYAPESPMYK VDDHEMKSNC LQSNRSHGSL NNLSNSVLEL KNADSYSTSN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGTCAG TGTAGTTGCT GCATTGTCAA TATACCTGTC TACGCAGTAG TGCTTCTGTA 60
GGTATATAGA AAAGAAAGGC ACAGTTGTCT CACTCTCAGA ACTCTGAAGA TATATACTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0007165--P:signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000535	Aegilops tauschii	80.53	0.00e+00	1640.00
IUUC-Atr-002498	Amborella trichopoda	45.07	0.00e+00	699.00
IUUC-Aly-006263	Arabidopsis lyrata	37.20	3.00e-152	531.00
IUUC-Ath-006648	Arabidopsis thaliana	42.69	0.00e+00	761.00
IUUC-Bdi-014493	Brachypodium distachyon	79.28	0.00e+00	1565.00
IUUC-Bol-016092	Brassica oleracea	43.97	0.00e+00	734.00
IUUC-Bra-016701	Brassica rapa	43.83	0.00e+00	748.00
IUUC-Dme-031844	Drosophila melanogaster	26.83	2.00e-08	52.00
IUUC-Gma-043180	Glycine max	42.83	0.00e+00	805.00
IUUC-Hvu-047807	Hordeum vulgare	84.41	0.00e+00	774.00
IUUC-Lpe-051180	Leersia perrieri	79.66	0.00e+00	1608.00
IUUC-Mtr-057703	Medicago truncatula	48.55	0.00e+00	776.00
IUUC-Mac-064996	Musa acuminata	56.38	0.00e+00	1107.00
IUUC-Oba-075721	Oryza barthii	80.55	0.00e+00	1620.00
IUUC-Obr-076233	Oryza brachyantha	79.96	0.00e+00	1605.00
IUUC-Ogl-077542	Oryza glaberrima	80.65	0.00e+00	1621.00
IUUC-Ogu-078363	Oryza glumaepatula	78.87	0.00e+00	1603.00
IUUC-Oin-079050	Oryza indica	80.55	0.00e+00	1635.00
IUUC-Olo-080332	Oryza longistaminata	75.02	0.00e+00	1486.00
IUUC-Ome-081772	Oryza meridionalis	79.68	0.00e+00	1595.00
IUUC-Oni-082467	Oryza nivara	78.78	0.00e+00	1578.00
IUUC-Opu-083132	Oryza punctata	80.55	0.00e+00	1611.00
IUUC-Oru-084836	Oryza rufipogon	78.78	0.00e+00	1609.00
IUUC-Osa-085493	Oryza sativa	80.55	0.00e+00	1640.00
IUUC-Pop-099360	Populus trichocarpa	47.62	0.00e+00	794.00
IUUC-Ppe-102099	Prunus persica	49.30	0.00e+00	823.00
IUUC-Sit-110371	Setaria italica	89.73	0.00e+00	1778.00
IUUC-Sly-111793	Solanum lycopersicum	49.28	0.00e+00	815.00
IUUC-Stu-112760	Solanum tuberosum	48.86	0.00e+00	804.00
IUUC-Tca-121753	Theobroma cacao	47.36	0.00e+00	881.00
IUUC-Tae-124317	Triticum aestivum	80.95	0.00e+00	1647.00
IUUC-Tur-126343	Triticum urartu	80.53	0.00e+00	1620.00
IUUC-Vvi-130975	Vitis vinifera	50.43	0.00e+00	893.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence