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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Spo-108192
UUCD1 version UUC-ScP-00180
Ensembl Protein ID SPAC13G7.08c.1:pep
UniProt Accession Q10272; IPI3_SCHPO
Genbank Protein ID BAA23358.1; CAA93596.1
Protein Name Pre-rRNA-processing protein crb3/ipi3
Genbank Nucleotide ID AB008572; CU329670
Gene Name crb3; ipi3; SPAC13G7.08c
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPAC13G7.08c SPAC13G7.08c.1 SPAC13G7.08c.1:pep
Annotation
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexMentha
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.00e-13 49.0 172 212
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf......sdtllvsGsdDgtikvWDlrtgvll 36
           gH+ s+ +++       s ++l ++s D+ti++WD++tg+ll
   Q: 172  GHKRSIVSMEIgpgpivS-GRLYTASEDNTIRIWDVSTGNLL 212
           799999999999777744.889****************9976 PP
   
Organism Schizosaccharomyces pombe
Functional Description
(View)

Functional Description


     Required for both pre-rRNA processing and heterochromatic gene silencing.
 Required for both pre-rRNA processing and heterochromatic gene silencing.
Protein Sequence
(Fasta)
MELLLSGCEA IEGEPSNVLC HNLHTGTLVS TFRQSSPAKN ATCTTLNHLL SAQHTRPQLN 60
IHNFGKEILD QSIILPEILI CVQSSPCGSW LAAGTEKGNL YIWSLKSGAL IYFFRAHYQP 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Spo-108192|E3,WD_repeat|Schizosaccharomyces pombe
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ACGACTTTTC TTGCAAATTT CGCTTTGTTG CTAACATTTC AGTTCAGCGA TTTGCGTTTA 60
TTCAACACGC ATTTCAAGGT TTATGGAGCT GCTTCTTTCT GGCTGTGAAG CTATTGAGGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Spo-108192|E3,WD_repeat|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0158--Chromosome
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0032153--C:cell division site
GO:0000775--C:chromosome, centromeric region
GO:0005829--C:cytosol
GO:0044732--C:mitotic spindle pole body
GO:0005720--C:nuclear heterochromatin
GO:0005634--C:nucleus
GO:0097344--C:Rix1 complex
GO:0030702--P:chromatin silencing at centromere
GO:0006364--P:rRNA processing
GO:0006351--P:transcription, DNA-templated
KEGG spo:SPAC13G7.08c
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001040 Aegilops tauschii 24.69 2.00e-20 91.30
IUUC-Aml-001819 Ailuropoda melanoleuca 25.88 1.00e-15 75.50
IUUC-Atr-002688 Amborella trichopoda 29.18 5.00e-25 106.00
IUUC-Aly-006061 Arabidopsis lyrata 27.36 2.00e-27 114.00
IUUC-Ath-007111 Arabidopsis thaliana 26.88 1.00e-24 105.00
IUUC-Acl-008357 Aspergillus clavatus 27.38 8.00e-25 106.00
IUUC-Afl-008564 Aspergillus flavus 26.01 1.00e-24 106.00
IUUC-Afu-009113 Aspergillus fumigatus 27.96 2.00e-27 115.00
IUUC-Ani-009132 Aspergillus nidulans 23.65 4.00e-23 100.00
IUUC-Ang-009586 Aspergillus niger 24.55 2.00e-24 104.00
IUUC-Aor-009882 Aspergillus oryzae 25.97 5.00e-24 103.00
IUUC-Ate-010249 Aspergillus terreus 24.70 1.00e-20 92.40
IUUC-Ame-010912 Astyanax mexicanus 27.30 2.00e-26 111.00
IUUC-Bgr-012242 Blumeria graminis 21.84 2.00e-16 78.60
IUUC-Bta-013402 Bos taurus 27.67 6.00e-19 86.30
IUUC-Bci-013791 Botrytis cinerea 27.13 2.00e-24 104.00
IUUC-Bdi-014455 Brachypodium distachyon 24.49 3.00e-22 97.80
IUUC-Bol-016342 Brassica oleracea 24.63 7.00e-23 99.80
IUUC-Bra-016967 Brassica rapa 24.93 8.00e-23 99.40
IUUC-Cja-019758 Callithrix jacchus 25.76 5.00e-18 83.20
IUUC-Cfa-020495 Canis familiaris 24.30 2.00e-16 78.20
IUUC-Cpo-021438 Cavia porcellus 26.90 7.00e-25 105.00
IUUC-Csa-023416 Chlorocebus sabaeus 26.32 5.00e-19 86.70
IUUC-Csv-025918 Ciona savignyi 26.91 2.00e-24 104.00
IUUC-Cgl-026618 Colletotrichum gloeosporioides 25.00 3.00e-21 94.40
IUUC-Cne-026843 Cryptococcus neoformans 28.12 2.00e-30 124.00
IUUC-Dre-027560 Danio rerio 25.67 3.00e-25 107.00
IUUC-Dno-029315 Dasypus novemcinctus 26.13 1.00e-27 115.00
IUUC-Dor-030935 Dipodomys ordii 25.97 3.00e-24 103.00
IUUC-Dse-031492 Dothistroma septosporum 25.65 5.00e-27 113.00
IUUC-Dme-032059 Drosophila melanogaster 24.70 6.00e-25 106.00
IUUC-Fca-036068 Felis catus 25.07 3.00e-15 74.30
IUUC-Fal-037467 Ficedula albicollis 27.40 9.00e-22 95.50
IUUC-Fox-037903 Fusarium oxysporum 23.75 4.00e-21 93.60
IUUC-Gmo-039323 Gadus morhua 27.89 5.00e-16 76.60
IUUC-Ggr-040050 Gaeumannomyces graminis 23.10 9.00e-10 56.20
IUUC-Gga-040563 Gallus gallus 28.83 2.00e-16 78.20
IUUC-Gac-042641 Gasterosteus aculeatus 23.61 8.00e-20 89.40
IUUC-Gma-044265 Glycine max 24.73 4.00e-30 123.00
IUUC-Ggo-045137 Gorilla gorilla 25.14 6.00e-15 73.20
IUUC-Hsa-046335 Homo sapiens 25.14 5.00e-15 73.60
IUUC-Hvu-047685 Hordeum vulgare 23.40 5.00e-22 96.70
IUUC-Itr-048032 Ictidomys tridecemlineatus 25.29 9.00e-26 108.00
IUUC-Kpa-049129 Komagataella pastoris 29.30 8.00e-36 142.00
IUUC-Lch-049532 Latimeria chalumnae 28.57 3.00e-28 117.00
IUUC-Lpe-051321 Leersia perrieri 24.91 3.00e-19 87.40
IUUC-Loc-052471 Lepisosteus oculatus 27.27 2.00e-22 97.80
IUUC-Lma-053091 Leptosphaeria maculans 22.93 1.00e-18 85.90
IUUC-Laf-054331 Loxodonta africana 25.23 4.00e-18 83.60
IUUC-Mcc-055803 Macaca mulatta 26.32 5.00e-19 86.70
IUUC-Meu-056090 Macropus eugenii 25.81 3.00e-25 107.00
IUUC-Mor-057160 Magnaporthe oryzae 22.95 2.00e-19 88.20
IUUC-Mtr-058800 Medicago truncatula 26.59 4.00e-29 120.00
IUUC-Mla-058943 Melampsora laricipopulina 35.15 3.00e-23 101.00
IUUC-Mga-059282 Meleagris gallopavo 28.21 2.00e-21 94.40
IUUC-Mvi-060315 Microbotryum violaceum 30.94 8.00e-22 96.70
IUUC-Mmr-061127 Microcebus murinus 26.15 3.00e-21 94.40
IUUC-Mdo-062350 Monodelphis domestica 26.69 2.00e-26 111.00
IUUC-Mmu-063706 Mus musculus 27.13 8.00e-25 106.00
IUUC-Mac-065554 Musa acuminata 29.92 2.00e-21 95.10
IUUC-Mpu-066711 Mustela putorius furo 22.69 9.00e-24 102.00
IUUC-Mlu-068121 Myotis lucifugus 26.91 2.00e-20 90.90
IUUC-Nfi-068454 Neosartorya fischeri 27.36 1.00e-26 112.00
IUUC-Ncr-068914 Neurospora crassa 22.29 2.00e-19 87.80
IUUC-Nle-069518 Nomascus leucogenys 26.11 4.00e-17 80.10
IUUC-Ont-071435 Oreochromis niloticus 27.19 1.00e-23 102.00
IUUC-Oba-075873 Oryza barthii 25.00 3.00e-28 117.00
IUUC-Obr-076097 Oryza brachyantha 26.38 1.00e-18 85.90
IUUC-Ogl-077840 Oryza glaberrima 25.07 6.00e-28 116.00
IUUC-Ogu-077988 Oryza glumaepatula 25.00 3.00e-28 117.00
IUUC-Oin-079237 Oryza indica 25.07 2.00e-22 97.80
IUUC-Olo-080415 Oryza longistaminata 25.61 3.00e-20 92.00
IUUC-Ome-081952 Oryza meridionalis 23.90 3.00e-27 114.00
IUUC-Oni-082300 Oryza nivara 25.00 3.00e-28 117.00
IUUC-Opu-083436 Oryza punctata 23.46 1.00e-20 92.40
IUUC-Oru-085164 Oryza rufipogon 25.07 3.00e-27 114.00
IUUC-Osa-086129 Oryza sativa 25.24 1.00e-28 118.00
IUUC-Ola-086571 Oryzias latipes 23.96 2.00e-25 108.00
IUUC-Olu-087630 Ostreococcus lucimarinus 29.92 4.00e-14 67.80
IUUC-Oga-088561 Otolemur garnettii 23.15 3.00e-23 100.00
IUUC-Oar-090131 Ovis aries 27.40 1.00e-15 75.50
IUUC-Pan-092810 Papio anubis 26.32 4.00e-19 87.00
IUUC-Psi-093091 Pelodiscus sinensis 26.57 4.00e-20 90.10
IUUC-Pno-095047 Phaeosphaeria nodorum 23.73 5.00e-15 73.90
IUUC-Ppa-095317 Physcomitrella patens 27.63 5.00e-26 110.00
IUUC-Pfo-096996 Poecilia formosa 28.35 2.00e-24 105.00
IUUC-Pab-097747 Pongo abelii 26.32 3.00e-18 84.30
IUUC-Pop-099609 Populus trichocarpa 25.95 3.00e-25 107.00
IUUC-Pca-100972 Procavia capensis 25.60 2.00e-15 74.70
IUUC-Ppe-101904 Prunus persica 25.52 4.00e-27 114.00
IUUC-Pva-102700 Pteropus vampyrus 26.55 7.00e-10 56.20
IUUC-Pgr-103616 Puccinia graminis 37.57 2.00e-22 98.20
IUUC-Ptt-103954 Puccinia triticina 37.74 5.00e-20 90.50
IUUC-Pte-104120 Pyrenophora teres 23.49 2.00e-19 88.60
IUUC-Pyt-104558 Pyrenophora triticirepentis 22.54 9.00e-18 82.80
IUUC-Rno-104933 Rattus norvegicus 27.22 3.00e-25 107.00
IUUC-Sce-106403 Saccharomyces cerevisiae 25.81 3.00e-22 97.80
IUUC-Sha-107636 Sarcophilus harrisii 26.69 1.00e-26 112.00
IUUC-Sja-107783 Schizosaccharomyces japonicus 52.91 4.00e-132 462.00
IUUC-Ssl-108384 Sclerotinia sclerotiorum 28.31 2.00e-26 111.00
IUUC-Smo-109498 Selaginella moellendorffii 26.69 5.00e-24 103.00
IUUC-Sit-110770 Setaria italica 27.49 4.00e-27 114.00
IUUC-Sly-111453 Solanum lycopersicum 26.93 2.00e-29 121.00
IUUC-Stu-112384 Solanum tuberosum 26.93 4.00e-29 120.00
IUUC-Sbi-113952 Sorghum bicolor 27.15 1.00e-26 112.00
IUUC-Sre-115223 Sporisorium reilianum 27.60 2.00e-21 95.50
IUUC-Ssc-115627 Sus scrofa 26.80 9.00e-19 85.90
IUUC-Tgu-117404 Taeniopygia guttata 27.05 2.00e-21 94.70
IUUC-Tru-117629 Takifugu rubripes 26.83 6.00e-23 99.80
IUUC-Tni-119839 Tetraodon nigroviridis 25.63 2.00e-21 94.70
IUUC-Tca-121766 Theobroma cacao 26.05 8.00e-27 112.00
IUUC-Tre-122047 Trichoderma reesei 24.17 2.00e-19 88.20
IUUC-Tvi-122668 Trichoderma virens 23.33 3.00e-18 84.00
IUUC-Tae-125634 Triticum aestivum 25.78 5.00e-23 100.00
IUUC-Tur-126673 Triticum urartu 25.33 3.00e-15 74.30
IUUC-Tme-127070 Tuber melanosporum 29.00 1.00e-30 125.00
IUUC-Ttr-128735 Tursiops truncatus 25.91 8.00e-16 76.30
IUUC-Uma-129521 Ustilago maydis 30.11 2.00e-21 95.10
IUUC-Vvi-130872 Vitis vinifera 29.02 1.00e-27 115.00
IUUC-Xtr-131838 Xenopus tropicalis 26.26 1.00e-21 95.90
IUUC-Xma-134106 Xiphophorus maculatus 27.52 2.00e-24 104.00
IUUC-Yli-134551 Yarrowia lipolytica 29.02 3.00e-41 160.00
IUUC-Zma-134703 Zea mays 26.80 1.00e-26 112.00
Created Date 25-Jun-2017

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