iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Osa-085680

UUCD1 version

UUC-OrS-00795

Ensembl Protein ID

OS06T0154200-01

UniProt Accession

Q5VMP0; A0A0P0WSH6; C7J3G5; Q5VMP1; MAX2_ORYSJ

Genbank Protein ID

BAD69288.1; BAD69289.1; BAH93336.1; BAS96220.1; OS06T0154200-01

Protein Name

F-box/LRR-repeat MAX2 homolog; F-box and leucine-rich repeat MAX2 homolog; Protein DWARF 3

Genbank Nucleotide ID

AP006533; AP006533; AP008212; AP014962; AK065478

Gene Name

D3; Os06g0154200; LOC_Os06g06050; OSJNBa0085L11.6-1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OS06G0154200	OS06T0154200-01	OS06T0154200-01

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box	F-box	24336200

Reviewed

Classification

Family	Identity	E-value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	47.11	3.00e-169	592.00	IUUC-Ath-007057

Organism

Oryza sativa

Functional Description
(View)

Part of a putative SCF (SKP1/Cullin/F-box) ubiquitin ligase complex. Interacts with D14 in a strigolactone-dependent manner.

Protein Sequence
(Fasta)

MAEEEEVEEG RSSSSAILDL PEPLLLHILS FLTDVRSRHR AALACGRMRA AERATRSELS 60
LRGDPRSPGF LFLSHAFRFP ALEHLDLSLV SPWGHPLLSS VPPCGGGGGG APSASSSSGM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACGTCGCCC ATGGCGGAAG AGGAGGAGGT GGAGGAGGGG AGGTCCTCGT CGTCGGCGAT 60
ACTGGACCTG CCGGAGCCGC TGCTGCTGCA CATCCTGAGC TTCCTGACGG ACGTGAGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-0433--Leucine-rich repeat
KW-1185--Reference proteome
KW-0677--Repeat
KW-0833--Ubl conjugation pathway

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

SMART

SM00367--LRR_CC

Gene Ontology

GO:0005634--C:nucleus
GO:0009926--P:auxin polar transport
GO:0042335--P:cuticle development
GO:0007275--P:multicellular organism development
GO:0010187--P:negative regulation of seed germination
GO:1902584--P:positive regulation of response to water deprivation
GO:0009934--P:regulation of meristem structural organization
GO:0009416--P:response to light stimulus
GO:0009414--P:response to water deprivation
GO:0010016--P:shoot system morphogenesis

KEGG

osa:9272469

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000912	Aegilops tauschii	74.23	5.00e-163	566.00
IUUC-Atr-002917	Amborella trichopoda	44.03	7.00e-146	509.00
IUUC-Aly-006349	Arabidopsis lyrata	46.81	1.00e-157	549.00
IUUC-Ath-007057	Arabidopsis thaliana	46.95	3.00e-171	594.00
IUUC-Bdi-014544	Brachypodium distachyon	80.44	0.00e+00	1044.00
IUUC-Bol-016586	Brassica oleracea	47.14	1.00e-171	595.00
IUUC-Bra-017251	Brassica rapa	47.48	4.00e-175	607.00
IUUC-Gma-042710	Glycine max	45.68	5.00e-161	560.00
IUUC-Hvu-047568	Hordeum vulgare	76.57	0.00e+00	799.00
IUUC-Lpe-051227	Leersia perrieri	95.10	0.00e+00	754.00
IUUC-Mtr-058145	Medicago truncatula	45.57	4.00e-169	587.00
IUUC-Mac-064499	Musa acuminata	63.67	1.00e-81	295.00
IUUC-Oba-075679	Oryza barthii	95.78	0.00e+00	1327.00
IUUC-Obr-076462	Oryza brachyantha	90.41	0.00e+00	1041.00
IUUC-Ogu-078600	Oryza glumaepatula	99.15	0.00e+00	1387.00
IUUC-Oin-079216	Oryza indica	99.61	0.00e+00	1050.00
IUUC-Olo-080841	Oryza longistaminata	97.12	0.00e+00	1033.00
IUUC-Ome-081978	Oryza meridionalis	98.80	0.00e+00	666.00
IUUC-Oni-082511	Oryza nivara	100.00	0.00e+00	1021.00
IUUC-Opu-083879	Oryza punctata	96.86	0.00e+00	945.00
IUUC-Oru-084189	Oryza rufipogon	99.80	0.00e+00	1020.00
IUUC-Ppa-095907	Physcomitrella patens	37.08	1.00e-68	253.00
IUUC-Pop-099037	Populus trichocarpa	46.42	6.00e-170	590.00
IUUC-Ppe-101483	Prunus persica	46.24	9.00e-171	592.00
IUUC-Smo-109407	Selaginella moellendorffii	42.48	2.00e-130	458.00
IUUC-Sit-110373	Setaria italica	77.50	0.00e+00	1033.00
IUUC-Sly-111183	Solanum lycopersicum	45.50	1.00e-160	558.00
IUUC-Stu-112390	Solanum tuberosum	46.70	7.00e-179	619.00
IUUC-Sbi-114083	Sorghum bicolor	77.39	0.00e+00	977.00
IUUC-Tca-120984	Theobroma cacao	47.92	1.00e-173	602.00
IUUC-Tae-124339	Triticum aestivum	74.74	0.00e+00	916.00
IUUC-Tur-126493	Triticum urartu	77.32	2.00e-127	446.00
IUUC-Vvi-131051	Vitis vinifera	47.08	2.00e-174	604.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence