iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114735

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G157500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g021020	Sb10g021020.1	Sb10g021020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.10e-09	38.0	113	155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle +kdg   + lp C H+fha C+ +w         +++CP+Cr
   Q: 113  CAVCLEGMKDGeaARRLPaCSHAFHAGCIDMW------LDSHATCPVCR 155
           ********88777777889*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSSAAAAEYP WRSQVLGEAV AAQRSRSRSA LVLASYPLLL LLVILAAFVR YLWVALTMYC 60
ALLFALSCAA RSLSVRSAAA SAARVSRGGL SATAIAAVAP AFPYKDDAAA AQCAVCLEGM 120

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Nucleotide Sequence
(Fasta)

ATGTCGTCGG CGGCGGCAGC GGAGTACCCG TGGCGCTCGC AGGTCCTCGG CGAAGCCGTG 60
GCGGCGCAGC GCAGCCGCAG CCGCAGCGCG CTGGTGCTGG CGTCGTATCC GCTGCTGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_10g021020

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014245	Brachypodium distachyon	50.36	2.00e-25	107.00
IUUC-Hvu-047387	Hordeum vulgare	53.66	7.00e-25	105.00
IUUC-Sit-110059	Setaria italica	67.05	4.00e-42	163.00
IUUC-Tae-123186	Triticum aestivum	57.60	2.00e-27	114.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence