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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105435
Ensembl Protein ID ENSRNOP00000066707.1
UniProt Accession M0RAY7; M0RAY7_RAT
Genbank Protein ID ENSRNOP00000066707
Protein Name WD repeat domain 36
Genbank Nucleotide ID AABR07031675
Gene Name Wdr36
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000027355.7 ENSRNOT00000031530.7 ENSRNOP00000036935.6
ENSRNOG00000027355.7 ENSRNOT00000075283.1 ENSRNOP00000066707.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.40e-21 76.1 566 602
UBD/Beta-Prp 7.90e-49 166.8 436 606
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH++ ++++ f +d + l+s++ D++++ WDl +g l
   Q: 566  GHQGQINDMTFsPDgRWLISAAMDCSVRTWDLPSGCL 602
           8***********99999***************99976 PP
   

   UBD/Beta-Prp
   S: 90   lkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtlt 176
           +k+++++++ +++   g++ ++G +   + v+++++g    +   ++ h g+v++v+v++ ++l ++++  r +++W+ k++ l++ l+
   Q: 436  VKANSATATVIDITSCGNFAIIGLSSGAVDVYNMQSGIHRGSfgDEKAHAGSVRGVAVDGLNQLAITAGSERLLKFWNFKSKVLVHSLS 524
           66788888999999999*******************99888777899*****************************************7 PP
   S: 177  gghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktl 260
              +++ + + +++++  l  + +d ++++ d++t ++vr++ gh+ +++++ fsp++ +l+s+++D s+r Wdl sg l+ ++
   Q: 525  L--DSPPNVMLLHRDSGILGLALDDFSITVLDIETRKIVREFSGHQGQINDMTFSPDGRWLISAAMDCSVRTWDLPSGCLIDCF 606
           5..77777788888889999999****************************************************999777666 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
AEMESAVEGR TASVLFAGFR ALGLFSNDIP HVVRYNALKR RFYVTTCVGK SFHTYDVQKL 60
SLVAVSNSVP QDICCMAADG RLVFAAYGNV FSAFARNKEI VHTFKGHKAE IHLLQPFGDH 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105435|E3,WD_repeat;UBD,Beta-Prp|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCGGAGATGG AGAGCGCTGT GGAAGGCCGC ACGGCCAGCG TGCTTTTCGC GGGGTTCCGG 60
GCCTTGGGGT TGTTCAGCAA CGACATTCCA CACGTGGTGC GGTACAACGC GCTCAAGCGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105435|E3,WD_repeat;UBD,Beta-Prp|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR024977--Apc4_WD40_dom
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0030516--P:regulation of axon extension
GO:0001895--P:retina homeostasis
GO:0006364--P:rRNA processing
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001096 Aegilops tauschii 36.11 1.00e-147 517.00
IUUC-Aml-002289 Ailuropoda melanoleuca 88.73 0.00e+00 1612.00
IUUC-Atr-002859 Amborella trichopoda 33.37 7.00e-127 448.00
IUUC-Apl-003505 Anas platyrhynchos 71.83 0.00e+00 1181.00
IUUC-Aca-004339 Anolis carolinensis 70.63 0.00e+00 1277.00
IUUC-Aly-005913 Arabidopsis lyrata 36.55 3.00e-154 539.00
IUUC-Ath-006767 Arabidopsis thaliana 36.77 3.00e-157 549.00
IUUC-Ago-007763 Ashbya gossypii 32.84 2.00e-120 427.00
IUUC-Acl-008275 Aspergillus clavatus 32.82 2.00e-92 333.00
IUUC-Afl-008457 Aspergillus flavus 32.91 1.00e-92 333.00
IUUC-Afu-008914 Aspergillus fumigatus 33.37 5.00e-102 365.00
IUUC-Ani-009225 Aspergillus nidulans 31.76 2.00e-100 360.00
IUUC-Aor-010046 Aspergillus oryzae 31.70 2.00e-116 413.00
IUUC-Ate-010337 Aspergillus terreus 32.44 1.00e-115 410.00
IUUC-Ame-010963 Astyanax mexicanus 65.47 0.00e+00 1197.00
IUUC-Bgr-011973 Blumeria graminis 29.89 3.00e-110 393.00
IUUC-Bta-012462 Bos taurus 88.20 0.00e+00 1582.00
IUUC-Bci-013940 Botrytis cinerea 30.62 3.00e-112 399.00
IUUC-Bdi-014725 Brachypodium distachyon 35.30 4.00e-150 525.00
IUUC-Bol-016534 Brassica oleracea 35.85 2.00e-150 526.00
IUUC-Bra-016781 Brassica rapa 35.64 5.00e-149 521.00
IUUC-Cel-018581 Caenorhabditis elegans 27.75 1.00e-92 334.00
IUUC-Cja-019675 Callithrix jacchus 88.72 0.00e+00 1625.00
IUUC-Cfa-020118 Canis familiaris 87.88 0.00e+00 1567.00
IUUC-Cpo-021798 Cavia porcellus 88.75 0.00e+00 1563.00
IUUC-Cre-022566 Chlamydomonas reinhardtii 29.66 1.00e-26 114.00
IUUC-Csa-023547 Chlorocebus sabaeus 89.19 0.00e+00 1606.00
IUUC-Cho-024518 Choloepus hoffmanni 76.89 0.00e+00 1236.00
IUUC-Cin-025339 Ciona intestinalis 45.98 0.00e+00 787.00
IUUC-Cgl-026476 Colletotrichum gloeosporioides 30.69 5.00e-114 405.00
IUUC-Cne-026859 Cryptococcus neoformans 34.52 2.00e-142 499.00
IUUC-Cme-027173 Cyanidioschyzon merolae 31.24 3.00e-78 286.00
IUUC-Dre-027733 Danio rerio 64.59 0.00e+00 1196.00
IUUC-Dno-029439 Dasypus novemcinctus 89.16 0.00e+00 1593.00
IUUC-Dor-030329 Dipodomys ordii 77.39 0.00e+00 1341.00
IUUC-Dse-031511 Dothistroma septosporum 29.53 4.00e-104 373.00
IUUC-Dme-031694 Drosophila melanogaster 40.47 0.00e+00 683.00
IUUC-Ete-032930 Echinops telfairi 82.42 0.00e+00 1318.00
IUUC-Eca-033302 Equus caballus 89.74 0.00e+00 1618.00
IUUC-Eeu-034516 Erinaceus europaeus 88.28 0.00e+00 1641.00
IUUC-Fca-036064 Felis catus 88.94 0.00e+00 1588.00
IUUC-Fal-037024 Ficedula albicollis 70.10 0.00e+00 1269.00
IUUC-Fox-037787 Fusarium oxysporum 28.85 4.00e-93 336.00
IUUC-Fso-038378 Fusarium solani 29.32 1.00e-94 341.00
IUUC-Gmo-039637 Gadus morhua 53.44 3.00e-153 535.00
IUUC-Ggr-040108 Gaeumannomyces graminis 29.86 4.00e-105 376.00
IUUC-Gga-040982 Gallus gallus 71.40 0.00e+00 1296.00
IUUC-Gac-041565 Gasterosteus aculeatus 57.16 0.00e+00 963.00
IUUC-Gma-043414 Glycine max 35.40 1.00e-153 537.00
IUUC-Ggo-045463 Gorilla gorilla 89.10 0.00e+00 1632.00
IUUC-Hsa-045675 Homo sapiens 89.07 0.00e+00 1635.00
IUUC-Hvu-047352 Hordeum vulgare 35.22 6.00e-134 471.00
IUUC-Itr-048088 Ictidomys tridecemlineatus 89.30 0.00e+00 1640.00
IUUC-Kpa-049164 Komagataella pastoris 32.76 1.00e-109 390.00
IUUC-Lch-050476 Latimeria chalumnae 69.47 0.00e+00 1268.00
IUUC-Lpe-051556 Leersia perrieri 29.62 2.00e-97 350.00
IUUC-Loc-052820 Lepisosteus oculatus 66.96 0.00e+00 1225.00
IUUC-Lma-052961 Leptosphaeria maculans 32.38 2.00e-107 383.00
IUUC-Laf-054006 Loxodonta africana 87.03 0.00e+00 1568.00
IUUC-Mcc-055037 Macaca mulatta 89.19 0.00e+00 1634.00
IUUC-Mor-057280 Magnaporthe oryzae 29.58 3.00e-108 386.00
IUUC-Mpo-057408 Magnaporthe poae 29.09 4.00e-100 359.00
IUUC-Mtr-058473 Medicago truncatula 34.62 3.00e-149 522.00
IUUC-Mla-058892 Melampsora laricipopulina 34.59 1.00e-116 414.00
IUUC-Mga-059598 Meleagris gallopavo 60.49 0.00e+00 1006.00
IUUC-Mvi-060334 Microbotryum violaceum 34.28 1.00e-117 418.00
IUUC-Mmr-061239 Microcebus murinus 88.41 0.00e+00 1590.00
IUUC-Mdo-062471 Monodelphis domestica 78.99 0.00e+00 1386.00
IUUC-Mmu-063872 Mus musculus 94.99 0.00e+00 1748.00
IUUC-Mac-064631 Musa acuminata 35.54 2.00e-134 473.00
IUUC-Mpu-066039 Mustela putorius furo 89.72 0.00e+00 1642.00
IUUC-Mlu-067485 Myotis lucifugus 88.65 0.00e+00 1617.00
IUUC-Nfi-068319 Neosartorya fischeri 30.35 3.00e-103 370.00
IUUC-Ncr-068725 Neurospora crassa 30.11 5.00e-103 369.00
IUUC-Nle-069050 Nomascus leucogenys 89.30 0.00e+00 1638.00
IUUC-Opr-070437 Ochotona princeps 79.05 6.00e-138 484.00
IUUC-Ont-071574 Oreochromis niloticus 58.67 0.00e+00 1032.00
IUUC-Oan-072826 Ornithorhynchus anatinus 74.92 0.00e+00 1341.00
IUUC-Ocu-073995 Oryctolagus cuniculus 89.50 0.00e+00 1571.00
IUUC-Oba-075407 Oryza barthii 32.64 4.00e-122 432.00
IUUC-Obr-076451 Oryza brachyantha 36.00 3.00e-155 542.00
IUUC-Ogl-077535 Oryza glaberrima 35.52 1.00e-149 524.00
IUUC-Ogu-077995 Oryza glumaepatula 32.15 1.00e-117 417.00
IUUC-Oin-079431 Oryza indica 35.82 6.00e-152 531.00
IUUC-Olo-080495 Oryza longistaminata 32.10 2.00e-116 413.00
IUUC-Oni-082336 Oryza nivara 34.36 7.00e-140 491.00
IUUC-Opu-084028 Oryza punctata 33.94 9.00e-127 447.00
IUUC-Oru-084500 Oryza rufipogon 32.03 1.00e-117 417.00
IUUC-Osa-086242 Oryza sativa 35.71 6.00e-152 531.00
IUUC-Ola-086612 Oryzias latipes 56.01 0.00e+00 816.00
IUUC-Olu-087703 Ostreococcus lucimarinus 29.48 4.00e-103 369.00
IUUC-Oga-088572 Otolemur garnettii 87.97 0.00e+00 1585.00
IUUC-Oar-090363 Ovis aries 88.60 0.00e+00 1621.00
IUUC-Ptr-090477 Pan troglodytes 89.30 0.00e+00 1621.00
IUUC-Pan-092914 Papio anubis 89.16 0.00e+00 1633.00
IUUC-Psi-093019 Pelodiscus sinensis 71.99 0.00e+00 1297.00
IUUC-Pma-094303 Petromyzon marinus 50.65 0.00e+00 796.00
IUUC-Pno-094938 Phaeosphaeria nodorum 32.47 2.00e-97 350.00
IUUC-Ppa-095720 Physcomitrella patens 33.94 1.00e-148 520.00
IUUC-Pfo-097034 Poecilia formosa 57.51 0.00e+00 991.00
IUUC-Pab-097669 Pongo abelii 89.39 0.00e+00 1634.00
IUUC-Pop-098835 Populus trichocarpa 36.02 8.00e-150 524.00
IUUC-Pca-101097 Procavia capensis 85.25 2.00e-175 609.00
IUUC-Ppe-101430 Prunus persica 35.38 7.00e-154 538.00
IUUC-Pva-103152 Pteropus vampyrus 88.96 0.00e+00 1635.00
IUUC-Pgr-103517 Puccinia graminis 31.57 1.00e-125 444.00
IUUC-Ptt-103697 Puccinia triticina 32.72 2.00e-103 370.00
IUUC-Pte-104121 Pyrenophora teres 30.88 2.00e-105 377.00
IUUC-Pyt-104672 Pyrenophora triticirepentis 31.08 2.00e-107 384.00
IUUC-Sce-106202 Saccharomyces cerevisiae 31.37 9.00e-111 394.00
IUUC-Sha-107272 Sarcophilus harrisii 79.17 0.00e+00 1331.00
IUUC-Sja-107744 Schizosaccharomyces japonicus 35.44 3.00e-149 522.00
IUUC-Spo-108256 Schizosaccharomyces pombe 35.49 1.00e-150 527.00
IUUC-Ssl-108618 Sclerotinia sclerotiorum 30.03 7.00e-112 398.00
IUUC-Smo-108762 Selaginella moellendorffii 36.65 8.00e-158 551.00
IUUC-Sit-110051 Setaria italica 36.11 1.00e-151 530.00
IUUC-Sly-111181 Solanum lycopersicum 34.32 2.00e-150 526.00
IUUC-Stu-112018 Solanum tuberosum 34.42 8.00e-151 527.00
IUUC-Sar-113348 Sorex araneus 86.48 0.00e+00 1128.00
IUUC-Sbi-114282 Sorghum bicolor 36.24 2.00e-153 536.00
IUUC-Sre-114946 Sporisorium reilianum 31.58 2.00e-95 343.00
IUUC-Ssc-115287 Sus scrofa 88.73 0.00e+00 1615.00
IUUC-Tgu-117138 Taeniopygia guttata 67.31 0.00e+00 1066.00
IUUC-Tru-118232 Takifugu rubripes 58.31 0.00e+00 1003.00
IUUC-Tsy-119502 Tarsius syrichta 74.41 0.00e+00 1302.00
IUUC-Tni-120378 Tetraodon nigroviridis 57.35 0.00e+00 981.00
IUUC-Tca-121506 Theobroma cacao 34.54 9.00e-145 507.00
IUUC-Tre-122166 Trichoderma reesei 29.47 3.00e-104 373.00
IUUC-Tvi-122385 Trichoderma virens 29.22 3.00e-105 377.00
IUUC-Tae-122836 Triticum aestivum 35.53 3.00e-153 535.00
IUUC-Tur-126490 Triticum urartu 32.02 2.00e-112 400.00
IUUC-Tme-127157 Tuber melanosporum 32.74 1.00e-109 390.00
IUUC-Tbe-127981 Tupaia belangeri 81.11 0.00e+00 1368.00
IUUC-Ttr-128886 Tursiops truncatus 87.15 0.00e+00 1576.00
IUUC-Uma-129439 Ustilago maydis 31.91 2.00e-103 370.00
IUUC-Vda-129760 Verticillium dahliae 29.59 7.00e-103 369.00
IUUC-Vpa-130456 Vicugna pacos 88.41 0.00e+00 1605.00
IUUC-Vvi-131086 Vitis vinifera 34.90 5.00e-148 518.00
IUUC-Xtr-131829 Xenopus tropicalis 68.13 0.00e+00 1239.00
IUUC-Xma-133588 Xiphophorus maculatus 57.13 0.00e+00 973.00
IUUC-Yli-134328 Yarrowia lipolytica 30.98 5.00e-113 402.00
IUUC-Zma-135808 Zea mays 36.08 2.00e-152 533.00
Created Date 25-Jun-2017

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