iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114529

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G259800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g028540	Sb10g028540.1	Sb10g028540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-06	29.6	120	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f   + +++lp C H fh +C+  w         + +CPlCr
   Q: 120  CAVCLGRFepTEALRLLPkCRHGFHVECVDTW------LDAHSTCPLCR 162
           ********7744499999**************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MERTRRLLLS DYDGAIESPL PSPPPPSSAT PFRPGVAVVV GILTSVFSIT FLLLLYAKHC 60
KRSAAESSGP YGSAGGSGSS GAGGAGGGDR RNSGVDRAVV ESLPVFRFGA LRGQKEGLEC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCGGA CGCGGCGGCT CCTGCTGTCG GACTACGACG GCGCGATCGA GTCGCCGCTG 60
CCGTCGCCGC CGCCGCCGTC CTCGGCCACG CCGTTCCGTC CCGGGGTGGC CGTCGTGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_09g030900

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002180	Ailuropoda melanoleuca	45.33	6.00e-16	77.80
IUUC-Atr-003122	Amborella trichopoda	40.53	2.00e-60	226.00
IUUC-Apl-003246	Anas platyrhynchos	47.14	2.00e-15	76.60
IUUC-Aca-005355	Anolis carolinensis	47.14	2.00e-15	76.60
IUUC-Aly-006151	Arabidopsis lyrata	43.14	3.00e-63	234.00
IUUC-Ath-007131	Arabidopsis thaliana	42.42	2.00e-55	208.00
IUUC-Bdi-014982	Brachypodium distachyon	78.62	1.00e-114	405.00
IUUC-Bol-015760	Brassica oleracea	40.79	6.00e-63	233.00
IUUC-Bra-017357	Brassica rapa	41.62	1.00e-61	229.00
IUUC-Cja-018848	Callithrix jacchus	47.14	2.00e-15	76.60
IUUC-Cfa-020959	Canis familiaris	45.33	6.00e-16	77.80
IUUC-Csa-024265	Chlorocebus sabaeus	45.33	6.00e-16	77.80
IUUC-Cho-024540	Choloepus hoffmanni	47.14	1.00e-15	77.00
IUUC-Dre-028201	Danio rerio	47.14	4.00e-15	75.90
IUUC-Dor-030261	Dipodomys ordii	47.14	1.00e-15	77.00
IUUC-Eca-034105	Equus caballus	45.33	7.00e-16	77.40
IUUC-Fal-037568	Ficedula albicollis	47.14	3.00e-15	75.90
IUUC-Gga-040685	Gallus gallus	47.14	2.00e-15	76.30
IUUC-Gac-042255	Gasterosteus aculeatus	47.14	1.00e-15	77.00
IUUC-Gma-042757	Glycine max	43.09	5.00e-53	200.00
IUUC-Ggo-044732	Gorilla gorilla	45.33	7.00e-16	77.40
IUUC-Hsa-046830	Homo sapiens	45.33	7.00e-16	77.80
IUUC-Hvu-047245	Hordeum vulgare	84.15	4.00e-56	210.00
IUUC-Itr-048694	Ictidomys tridecemlineatus	45.33	5.00e-16	78.20
IUUC-Lch-050401	Latimeria chalumnae	47.14	2.00e-15	76.60
IUUC-Lpe-051226	Leersia perrieri	75.94	1.00e-106	379.00
IUUC-Loc-052875	Lepisosteus oculatus	47.14	3.00e-15	75.10
IUUC-Mcc-054969	Macaca mulatta	45.33	1.00e-15	76.60
IUUC-Meu-056433	Macropus eugenii	47.14	2.00e-15	76.30
IUUC-Mtr-057973	Medicago truncatula	39.30	1.00e-49	189.00
IUUC-Mga-059597	Meleagris gallopavo	45.71	4.00e-14	71.60
IUUC-Mmr-061247	Microcebus murinus	47.14	2.00e-15	76.30
IUUC-Mdo-061822	Monodelphis domestica	47.14	2.00e-15	76.30
IUUC-Mac-065494	Musa acuminata	50.15	6.00e-62	230.00
IUUC-Nle-069466	Nomascus leucogenys	47.14	2.00e-15	76.60
IUUC-Ont-072424	Oreochromis niloticus	47.14	1.00e-15	77.00
IUUC-Ocu-073866	Oryctolagus cuniculus	47.14	2.00e-15	76.60
IUUC-Oba-075267	Oryza barthii	76.46	4.00e-107	380.00
IUUC-Ogl-077528	Oryza glaberrima	79.57	1.00e-106	379.00
IUUC-Ogu-078754	Oryza glumaepatula	76.51	1.00e-108	385.00
IUUC-Oin-079781	Oryza indica	76.70	2.00e-108	385.00
IUUC-Ome-081863	Oryza meridionalis	76.70	9.00e-109	385.00
IUUC-Oni-082943	Oryza nivara	76.70	2.00e-108	385.00
IUUC-Opu-083466	Oryza punctata	78.40	1.00e-118	418.00
IUUC-Oru-084675	Oryza rufipogon	76.70	2.00e-108	385.00
IUUC-Osa-085804	Oryza sativa	79.08	6.00e-119	419.00
IUUC-Ola-086904	Oryzias latipes	47.14	3.00e-15	75.90
IUUC-Oga-087997	Otolemur garnettii	47.14	2.00e-15	76.30
IUUC-Ptr-091155	Pan troglodytes	45.33	6.00e-16	77.80
IUUC-Pan-092597	Papio anubis	45.33	6.00e-16	77.80
IUUC-Psi-093539	Pelodiscus sinensis	47.14	2.00e-15	76.30
IUUC-Ppa-095281	Physcomitrella patens	53.74	9.00e-35	140.00
IUUC-Pfo-096604	Poecilia formosa	47.14	1.00e-15	77.40
IUUC-Pop-099148	Populus trichocarpa	44.90	4.00e-63	234.00
IUUC-Ppe-102095	Prunus persica	47.06	3.00e-56	211.00
IUUC-Rno-105434	Rattus norvegicus	45.33	9.00e-16	76.60
IUUC-Sha-107023	Sarcophilus harrisii	47.14	2.00e-15	76.30
IUUC-Sit-109970	Setaria italica	84.70	2.00e-130	457.00
IUUC-Sly-111677	Solanum lycopersicum	41.62	1.00e-60	226.00
IUUC-Stu-112327	Solanum tuberosum	63.45	2.00e-52	198.00
IUUC-Sar-112966	Sorex araneus	47.14	2.00e-15	76.30
IUUC-Ssc-115502	Sus scrofa	47.14	2.00e-15	76.60
IUUC-Tgu-117480	Taeniopygia guttata	47.14	2.00e-15	76.30
IUUC-Tru-118715	Takifugu rubripes	42.47	4.00e-15	75.50
IUUC-Tni-120282	Tetraodon nigroviridis	42.47	4.00e-15	75.10
IUUC-Tae-124580	Triticum aestivum	84.76	9.00e-59	219.00
IUUC-Vpa-130240	Vicugna pacos	47.14	3.00e-15	75.90
IUUC-Vvi-131553	Vitis vinifera	42.70	2.00e-70	258.00
IUUC-Xtr-132852	Xenopus tropicalis	47.14	5.00e-16	77.80
IUUC-Xma-133395	Xiphophorus maculatus	47.14	1.00e-15	77.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence