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Tag Content
iUUCD ID IUUC-Sbi-114531
Ensembl Protein ID Sb10g029890.1
UniProt Accession C5XMN7; C5XMN7_SORBI
Genbank Protein ID EES02349.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000762
Gene Name SORBI_003G041500
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb10g029890 Sb10g029890.1 Sb10g029890.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.50e-11 44.9 148 183
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
    +sv++laf ++ + l+s+++Dg ++ WDl t ++++
   Q: 148 GSVRSLAFaDGgNQLLSSGGDGHVYHWDLGTRKCIH 183
    79******97779****************9999876 PP
   

Organism Sorghum bicolor
Protein Sequence
(Fasta)
MLEFSRLVDA NIQDPSSGPI NSVQFHRNGQ LMLAAGLDKH LRFFQIDGKR NPKIQSIFIG 60
DCPVHKASFL PDGSEVMLSG RRKFFYSFDL VNAAVSKIGP LTGREEKSLE SFEISPDSRT 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Sbi-114531|E3,WD_repeat|Sorghum bicolor
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTTAGAGT TCTCAAGACT TGTTGATGCC AATATCCAGG ATCCATCAAG TGGTCCTATC 60
AATTCAGTGC AGTTTCATAG GAATGGGCAG CTGATGCTTG CTGCAGGTTT GGACAAGCAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Sbi-114531|E3,WD_repeat|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG sbi:SORBI_03g003690
Created Date 25-Jun-2017

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