iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Hvu-047370

Ensembl Protein ID

MLOC_67697.1

UniProt Accession

F2DLR2; F2DLR2_HORVV

Genbank Protein ID

BAJ96033.1; BAK03414.1

Protein Name

Predicted protein

Genbank Nucleotide ID

AK364830; AK372216

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MLOC_67697	MLOC_67697.1	MLOC_67697.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-25	88.4	443	476
UBD/Beta-Prp	3.60e-43	148.9	394	652

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlr 31
           H+++v+++af  ++  l +v+++dD+ i+vWD++
   Q: 443  HSGGVNDIAFsrPNkQLcVVTCGDDKLIRVWDMH 476
           9**********9774334799***********75 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkgheds 96
           l ++ + +i+ v++spd++l+ ++++ + i ++ +++++    + +++ h+++v+++ fs+  k    vt+++D++i+vwd+   + +++++ghe+ 
   Q: 394  LAKDSSMPINRVTWSPDGDLIGVAFAKHLIHLHAYQQPNEtrqVLEIEAHSGGVNDIAFSRPNKqlCVVTCGDDKLIRVWDMHG-QKIYSFEGHEAP 489
           566778899*****************************997777888*************98888999*************975.55799******* PP
   S: 97   vlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtl...tgghtdsvy 184
           v+s+  +   + +++ s+s d  i+ w  ++     + +++  ++ +++ ++ dg  l+s+++    D+ +  W+ + g++ rt    +++  + v+
   Q: 490  VYSICPHHkeTIQFIFSTSIDGKIKAWLYDNAGSRVDYDAPG-KWCTTMLYSADGTRLFSCGTskegDSHLVEWNESEGSIKRTYsgfRKKASGVVQ 585
           ***888776455***************999887777566655.599999999999888888764555888888***********9665444555665 PP
   S: 185  sls.fdsngkelvsgsldgtvklwdlqtgecvrtlnght..dnvksvrfspnderlvsgssDgsiri 248
            +  fd  +++++++++d+++k+wd+ +++++    +        ++rf +++++l++++ D+  +i
   Q: 586  GVVqFDTAQNHILAAGEDSQIKFWDVDNTNMLTCIDADGglPGLPRLRFNKEGNLLAVTTVDNGFKI 652
           5548***********************9986554444443323345677777777777777776665 PP

Organism

Hordeum vulgare

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNIKY FEEKVHAGEW DEVERYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDRHDR AKAVDILVKD LKVFSTFNEE LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGCGCCCTT CGATTCCGCT TCCCCCAGCC TTTCATATAA GGACCCCAGC CTATCCATAT 60
GCGCGTGTGC GTATCGATAC GCGGTGCCGC GTATCGCAGA TAAGCCAGTG GGGGTGGCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000072	Aegilops tauschii	90.56	0.00e+00	1934.00
IUUC-Aly-005503	Arabidopsis lyrata	69.72	0.00e+00	1592.00
IUUC-Ath-006901	Arabidopsis thaliana	70.42	0.00e+00	1610.00
IUUC-Bdi-014677	Brachypodium distachyon	92.49	0.00e+00	2075.00
IUUC-Bol-016487	Brassica oleracea	69.50	0.00e+00	1551.00
IUUC-Bra-016798	Brassica rapa	69.41	0.00e+00	1543.00
IUUC-Gma-042940	Glycine max	71.80	0.00e+00	1677.00
IUUC-Lpe-050951	Leersia perrieri	86.12	0.00e+00	1898.00
IUUC-Mtr-058168	Medicago truncatula	71.60	0.00e+00	1676.00
IUUC-Mac-064660	Musa acuminata	73.99	0.00e+00	1669.00
IUUC-Oba-075415	Oryza barthii	87.64	0.00e+00	2018.00
IUUC-Obr-076726	Oryza brachyantha	87.13	0.00e+00	2029.00
IUUC-Ogl-077810	Oryza glaberrima	87.64	0.00e+00	2018.00
IUUC-Ogu-078090	Oryza glumaepatula	87.64	0.00e+00	2018.00
IUUC-Oin-080158	Oryza indica	86.76	0.00e+00	2016.00
IUUC-Olo-080271	Oryza longistaminata	85.88	0.00e+00	1968.00
IUUC-Ome-081965	Oryza meridionalis	87.38	0.00e+00	2011.00
IUUC-Oni-082421	Oryza nivara	87.47	0.00e+00	2016.00
IUUC-Opu-083912	Oryza punctata	87.91	0.00e+00	2023.00
IUUC-Oru-085201	Oryza rufipogon	87.64	0.00e+00	2018.00
IUUC-Osa-086161	Oryza sativa	87.64	0.00e+00	2018.00
IUUC-Pop-099188	Populus trichocarpa	70.50	0.00e+00	1627.00
IUUC-Ppe-102061	Prunus persica	71.25	0.00e+00	1645.00
IUUC-Sit-110487	Setaria italica	87.73	0.00e+00	1995.00
IUUC-Sly-111169	Solanum lycopersicum	70.90	0.00e+00	1289.00
IUUC-Stu-112369	Solanum tuberosum	70.67	0.00e+00	1289.00
IUUC-Sbi-113873	Sorghum bicolor	87.20	0.00e+00	1992.00
IUUC-Tca-121768	Theobroma cacao	71.02	0.00e+00	1655.00
IUUC-Tae-125707	Triticum aestivum	97.71	0.00e+00	2205.00
IUUC-Tur-126477	Triticum urartu	92.48	0.00e+00	2170.00
IUUC-Vvi-131297	Vitis vinifera	73.29	0.00e+00	1678.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence