iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110507

Ensembl Protein ID

Si000248m

UniProt Accession

K3XED1; K3XED1_SETIT

Genbank Protein ID

KQL06594.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003532

Gene Name

LOC101762322; SETIT_0002481mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si000248m.g	Si000248m	Si000248m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-09	36.5	346	381

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.........sdtllvsGsdDgtikvW 28
           H+++v+++ +         s+ ll++G+ Dg++k+W
   Q: 346  HKSWVSAITWevssagsskSSLLLATGCSDGSVKIW 381
           *************99987544889************ PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MSAMAPHYQA ATLIASPSYP NAIAWSSDNL VAVASGHIVT ILNPAALEGP RGLVGLRRSD 60
PFPIGVVNRE DLFEPCLVPT CLARDTEPCA RSISWSQQGF APNYGCLLAV CTVDGRVKLY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAACGGCAG CGGCGGCGCG GCCCCGCGGG GAGGCCGGAG GGCGAGCAGG CGGCGTTGGG 60
CGAGGCAAAG GCGGAGCCGC GGCGGCGCAC TTGACGCAGG CGTACGGCGA CCTGCGCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011041--Quinoprot_gluc/sorb_DH
IPR024761--TFIIIC_delta_N
IPR024764--TFIIIC_Znf
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2

Pfam

PF12657--TFIIIC_delta
PF12660--zf-TFIIIC

SMART

SM00320--WD40

Gene Ontology

GO:0003824--F:catalytic activity

KEGG

sita:101762322

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003046	Amborella trichopoda	38.90	7.00e-95	341.00
IUUC-Aly-005715	Arabidopsis lyrata	38.48	4.00e-149	521.00
IUUC-Ath-007637	Arabidopsis thaliana	39.07	1.00e-157	550.00
IUUC-Bdi-014902	Brachypodium distachyon	66.19	0.00e+00	1095.00
IUUC-Bol-016169	Brassica oleracea	40.12	5.00e-101	361.00
IUUC-Bra-017736	Brassica rapa	40.73	2.00e-154	539.00
IUUC-Gma-043537	Glycine max	38.59	4.00e-113	401.00
IUUC-Mtr-058653	Medicago truncatula	37.69	1.00e-156	546.00
IUUC-Mac-065235	Musa acuminata	45.45	9.00e-147	513.00
IUUC-Ogl-077286	Oryza glaberrima	61.18	0.00e+00	1035.00
IUUC-Oin-079863	Oryza indica	60.94	0.00e+00	1090.00
IUUC-Oru-084242	Oryza rufipogon	59.37	0.00e+00	1045.00
IUUC-Osa-085660	Oryza sativa	61.26	0.00e+00	1093.00
IUUC-Ppa-095823	Physcomitrella patens	31.17	4.00e-65	241.00
IUUC-Pop-098900	Populus trichocarpa	41.25	0.00e+00	650.00
IUUC-Ppe-101763	Prunus persica	42.32	4.00e-177	614.00
IUUC-Smo-108757	Selaginella moellendorffii	31.31	3.00e-103	369.00
IUUC-Sly-111401	Solanum lycopersicum	38.70	1.00e-109	389.00
IUUC-Stu-112879	Solanum tuberosum	40.00	9.00e-93	333.00
IUUC-Tca-121440	Theobroma cacao	41.42	2.00e-177	615.00
IUUC-Tae-124422	Triticum aestivum	68.34	0.00e+00	1121.00
IUUC-Vvi-131537	Vitis vinifera	41.16	5.00e-122	431.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence