iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005828

UUCD1 version

UUC-ArL-00941

Ensembl Protein ID

fgenesh2_kg.6__19__AT5G01830.1

UniProt Accession

D7M6E9; D7M6E9_ARALL

Genbank Protein ID

EFH49251.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_486885

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__19__AT5G01830.1	fgenesh2_kg.6__19__AT5G01830.1	fgenesh2_kg.6__19__AT5G01830.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.20e-32	111.6	269	341

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpI+lelMrdPvv+++G+tydr+sI  w++sg++tcP+t+q l++++l+Pn +l++li  wc ++++
   Q: 269  IPADFRCPITLELMRDPVVVSTGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLIPNRALKNLIVLWCRDQKI 341
           8*******************************************************************99875 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAVTLDSAFP ARKRRPLVVD SPKLSDAKLT RSLFLASHEI ASMQPLRFIL RPNSLSLIRK 60
VKILASVFDE LLLRSQLLVY SQSAQLCFEE MQIVMQRIKS LIDDCSRVSK LWLLLQIDIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAATGTTTG ACCTCTTGCC TCTGGGGCTC CTCTGTAATC TATAAGGCGG CTTTGTCCTC 60
TGTGCGACTG ACTGACTTCT TCTGACGGCT CCGTCCACCG TCGTCTCTTC TTCCGTTACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0010200--P:response to chitin

KEGG

aly:ARALYDRAFT_486885

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000493	Aegilops tauschii	48.72	1.00e-69	256.00
IUUC-Atr-002566	Amborella trichopoda	43.89	1.00e-117	416.00
IUUC-Ath-007101	Arabidopsis thaliana	95.40	0.00e+00	1214.00
IUUC-Bdi-014870	Brachypodium distachyon	45.91	6.00e-125	440.00
IUUC-Bol-015511	Brassica oleracea	82.69	0.00e+00	1059.00
IUUC-Bra-017197	Brassica rapa	82.27	0.00e+00	1047.00
IUUC-Gma-043531	Glycine max	56.27	1.00e-166	579.00
IUUC-Hvu-047557	Hordeum vulgare	47.38	5.00e-117	414.00
IUUC-Lpe-051445	Leersia perrieri	44.50	5.00e-109	387.00
IUUC-Mtr-058241	Medicago truncatula	54.84	9.00e-164	569.00
IUUC-Mac-065033	Musa acuminata	45.92	2.00e-107	382.00
IUUC-Oba-075591	Oryza barthii	46.43	4.00e-113	401.00
IUUC-Obr-076550	Oryza brachyantha	45.66	2.00e-99	355.00
IUUC-Ogl-077709	Oryza glaberrima	46.43	4.00e-113	401.00
IUUC-Ogu-078626	Oryza glumaepatula	46.43	3.00e-113	401.00
IUUC-Oin-080113	Oryza indica	46.27	9.00e-113	400.00
IUUC-Olo-080301	Oryza longistaminata	43.06	1.00e-70	260.00
IUUC-Ome-081924	Oryza meridionalis	46.63	4.00e-115	407.00
IUUC-Oni-082284	Oryza nivara	46.43	4.00e-113	401.00
IUUC-Opu-083971	Oryza punctata	46.23	7.00e-110	390.00
IUUC-Oru-084898	Oryza rufipogon	46.27	3.00e-121	428.00
IUUC-Osa-085986	Oryza sativa	44.11	3.00e-109	388.00
IUUC-Pop-099292	Populus trichocarpa	58.75	0.00e+00	735.00
IUUC-Ppe-101643	Prunus persica	59.10	0.00e+00	744.00
IUUC-Sit-110652	Setaria italica	44.67	7.00e-124	437.00
IUUC-Sly-111346	Solanum lycopersicum	55.86	0.00e+00	689.00
IUUC-Stu-112435	Solanum tuberosum	55.54	0.00e+00	661.00
IUUC-Sbi-114567	Sorghum bicolor	42.75	2.00e-110	392.00
IUUC-Tca-121203	Theobroma cacao	62.77	0.00e+00	762.00
IUUC-Tae-124205	Triticum aestivum	45.52	2.00e-104	372.00
IUUC-Vvi-131545	Vitis vinifera	60.83	0.00e+00	689.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence