iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014938

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000881

Gene Name

LOC100843662; BRADI_2g47940

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI2G47940	BRADI2G47940.1	BRADI2G47940.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-25	88.0	287	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H ++v+c+++  +d +++++Gs D+++++WD
   Q: 287  HGGDVHCVDWnlHDvNYILTGSADNSVRMWD 317
           99**********999**************** PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MKERGGSRAA VDERYAQWKS LIPVLYDWFA NHNLVWPSLS CRWGPQFEQA TYKNRQRLYL 60
SEQTDGSVPN TLVIANCEVV KPRVAAAEHI SQFNEEARSP FVKKFKTIIH PGEVNRIREL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATCGCACCG GGACACTGCG GGAGGAGCGG GAGGCAGACA GAAACAGTTC AGAGCCGCTC 60
TCCACCCACA GAGAGCGTGA GAGAGGCGCG GAGCAGTCGC CGGCAGCGGC CAGTAGCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

bdi:100843662

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000914	Aegilops tauschii	89.70	0.00e+00	774.00
IUUC-Atr-003045	Amborella trichopoda	78.68	0.00e+00	701.00
IUUC-Aly-006131	Arabidopsis lyrata	76.84	0.00e+00	730.00
IUUC-Ath-007494	Arabidopsis thaliana	76.84	0.00e+00	730.00
IUUC-Bol-015567	Brassica oleracea	78.12	0.00e+00	729.00
IUUC-Bra-017393	Brassica rapa	78.17	0.00e+00	728.00
IUUC-Gma-042982	Glycine max	78.07	0.00e+00	732.00
IUUC-Hvu-047149	Hordeum vulgare	92.25	9.00e-68	247.00
IUUC-Lpe-051595	Leersia perrieri	82.33	0.00e+00	724.00
IUUC-Mtr-057993	Medicago truncatula	76.82	0.00e+00	726.00
IUUC-Mac-065523	Musa acuminata	76.62	3.00e-175	607.00
IUUC-Oba-075959	Oryza barthii	83.23	0.00e+00	746.00
IUUC-Obr-076021	Oryza brachyantha	89.89	0.00e+00	838.00
IUUC-Ogl-077211	Oryza glaberrima	89.46	0.00e+00	826.00
IUUC-Ogu-078314	Oryza glumaepatula	79.35	0.00e+00	694.00
IUUC-Oin-079269	Oryza indica	91.01	0.00e+00	833.00
IUUC-Olo-080631	Oryza longistaminata	77.18	0.00e+00	729.00
IUUC-Oni-082416	Oryza nivara	85.16	0.00e+00	771.00
IUUC-Opu-083571	Oryza punctata	78.60	0.00e+00	697.00
IUUC-Oru-084902	Oryza rufipogon	84.30	0.00e+00	756.00
IUUC-Osa-085579	Oryza sativa	91.01	0.00e+00	833.00
IUUC-Olu-087795	Ostreococcus lucimarinus	40.53	4.00e-84	304.00
IUUC-Ppa-095350	Physcomitrella patens	62.42	6.00e-168	582.00
IUUC-Pop-099098	Populus trichocarpa	76.33	0.00e+00	715.00
IUUC-Ppe-101724	Prunus persica	77.97	0.00e+00	728.00
IUUC-Sit-110597	Setaria italica	90.99	0.00e+00	805.00
IUUC-Sly-111411	Solanum lycopersicum	77.73	0.00e+00	717.00
IUUC-Stu-112285	Solanum tuberosum	79.71	7.00e-166	575.00
IUUC-Sbi-114341	Sorghum bicolor	89.47	0.00e+00	788.00
IUUC-Tca-121523	Theobroma cacao	78.02	0.00e+00	739.00
IUUC-Tae-125672	Triticum aestivum	91.95	0.00e+00	863.00
IUUC-Tur-126763	Triticum urartu	78.15	0.00e+00	773.00
IUUC-Vvi-131642	Vitis vinifera	77.78	0.00e+00	717.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence