iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017033

Ensembl Protein ID

Bra033466.1-P

UniProt Accession

M4EXC9; M4EXC9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra033466	Bra033466.1	Bra033466.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.90e-25	86.9	176	211
UBD/Beta-Prp	1.30e-42	147.0	174	416

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrtgvllk 37
           H+ds++cla    +++ sGs+D+t+kvW+l++ ++l 
   Q: 176  HSDSISCLAV-HaGIIYSGSWDKTLKVWRLSDLKCLE 211
           *********9.559******************99986 PP

UBD/Beta-Prp

   S: 49   sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee............. 131
            +h++ ++++  +    i+ +gs D+t+kvw ls+ kc+ ++k+h+d +  l + +   ++ s+s+d  i++w  e+++   +             
   Q: 174  IEHSDSISCLAVHAG--IIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLFVGE--GRVYSASADGKIKIWGKEKRKQTGSslsshssssscsh 265
           68***********99..***************************************..***************99988888779999********* PP
   S: 132  ....tlsghdgv.vncvvvhpdgnllvsGslDrtvrlWdl.ktgkllrtl......tgghtdsvyslsfdsngkelvsgsldgtvklwdlq.tgec 214
               tl+g+ +v vn+vvv++dg+ +  G+ D++v+ W   + g   +++      +g h+ +v ++ +  +   + sgs d+++ lw  + +g+ 
   Q: 266  vlkaTLEGRAEVsVNSVVVSGDGKWVYGGGSDGFVMGWEKrEKGGDFEEWelgfemRG-HKMAVLCMCLVGE--MVCSGSADKSIGLWKREgSGKL 358
           ****9999988559************************98766777777777777688.********99995..6***************996665 PP
   S: 215  ..vrtlnghtdnvksvrfs....pnderlvsgssDgsiriW......dlrsgdllktl 260
             v   +gh+ +vk++++s      +  l+sg+ D+sir+W      +l+  +  +++
   Q: 359  ckVGVIQGHEGPVKCLQASpnnvGAGFMLYSGGLDKSIRVWwvpkqdNLEEEKKKTSF 416
           57999**************443334689************988888888777776666 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MVRSIQEGDL MTSSPSSSST TTSNGTDSDG SLSPSSSSKS FVLSALTPFI TAAYKPLAVL 60
SAHVGSVSSL ALCGEFLLSA SQGKDIIVWQ QPDLKIFAKF GQGDGSVKAL VSVGSKVFTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGAGAT CAATCCAAGA AGGAGACTTG ATGACGTCTT CACCTTCTTC CTCTTCAACA 60
ACCACAAGCA ACGGAACCGA CTCCGACGGT TCCCTCAGCC CCTCCTCCTC CTCAAAAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006729	Arabidopsis thaliana	84.91	0.00e+00	665.00
IUUC-Bdi-014229	Brachypodium distachyon	54.83	2.00e-95	342.00
IUUC-Bol-015324	Brassica oleracea	96.46	0.00e+00	696.00
IUUC-Gma-043773	Glycine max	72.78	1.00e-141	496.00
IUUC-Hvu-047162	Hordeum vulgare	53.05	7.00e-76	276.00
IUUC-Lpe-050845	Leersia perrieri	52.27	5.00e-89	320.00
IUUC-Oba-075989	Oryza barthii	57.45	5.00e-113	400.00
IUUC-Obr-076522	Oryza brachyantha	56.57	2.00e-110	392.00
IUUC-Ogl-077747	Oryza glaberrima	56.43	2.00e-111	395.00
IUUC-Ogu-078306	Oryza glumaepatula	57.92	3.00e-110	391.00
IUUC-Oin-079397	Oryza indica	57.38	2.00e-109	389.00
IUUC-Ome-081295	Oryza meridionalis	56.83	5.00e-109	387.00
IUUC-Oni-082259	Oryza nivara	56.43	2.00e-111	395.00
IUUC-Opu-083686	Oryza punctata	57.30	1.00e-110	392.00
IUUC-Oru-084598	Oryza rufipogon	57.38	2.00e-109	389.00
IUUC-Osa-085705	Oryza sativa	56.43	9.00e-107	379.00
IUUC-Ppe-101179	Prunus persica	71.65	1.00e-150	525.00
IUUC-Sit-109966	Setaria italica	59.77	1.00e-104	373.00
IUUC-Sbi-114323	Sorghum bicolor	53.12	9.00e-102	363.00
IUUC-Tca-121448	Theobroma cacao	74.86	2.00e-149	521.00
IUUC-Tae-123437	Triticum aestivum	55.61	3.00e-104	371.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence