iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099519

Ensembl Protein ID

POPTR_0001s06020.1

UniProt Accession

B9GM47; B9GM47_POPTR

Genbank Protein ID

EEE82575.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_841786; POPTR_0001s06020g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s06020	POPTR_0001s06020.1	POPTR_0001s06020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.30e-21	74.2	192	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           H+ds++cla  + +l+ sGs+D+t+kvW++++ ++l 
   Q: 192  HADSISCLAVyN-GLVYSGSWDKTLKVWRISDLKCLE 227
           9********756.9****************9999986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDLLVSEITT PSTPLLFAAA TSTIGMSSTS SSSSICSSEA SEDSPAISFR FELQDVKYDY 60
PSKSLSGAYS YRPLAVLSDH VGPVSCLALC GEFILSASQG KDIIVWQQPD LRLFTKFGQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCGCTCCTC TCTCCGCTCC TCTCTCTTTC TCTCTCAAAG ACAAGAAAAA CCTTTTTTCA 60
GACCAAGAAA CAAGATTCCA GACTGGTTAC GGTCGCTTCA ATGGATCTTC TTGTGTCAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0001s06020g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005620	Arabidopsis lyrata	75.56	3.00e-150	524.00
IUUC-Bdi-014229	Brachypodium distachyon	57.80	6.00e-100	357.00
IUUC-Lpe-050845	Leersia perrieri	56.37	3.00e-93	335.00
IUUC-Mtr-058525	Medicago truncatula	78.30	2.00e-160	558.00
IUUC-Oba-075989	Oryza barthii	63.02	2.00e-116	411.00
IUUC-Obr-076522	Oryza brachyantha	61.88	2.00e-115	408.00
IUUC-Ogl-077747	Oryza glaberrima	61.81	5.00e-115	407.00
IUUC-Ogu-078306	Oryza glumaepatula	61.81	7.00e-115	406.00
IUUC-Oin-079397	Oryza indica	61.63	1.00e-114	405.00
IUUC-Olo-080627	Oryza longistaminata	63.87	6.00e-79	286.00
IUUC-Ome-081295	Oryza meridionalis	61.05	7.00e-114	403.00
IUUC-Oni-082259	Oryza nivara	61.81	5.00e-115	407.00
IUUC-Opu-083686	Oryza punctata	63.13	1.00e-117	416.00
IUUC-Oru-084598	Oryza rufipogon	61.63	1.00e-114	405.00
IUUC-Osa-085705	Oryza sativa	61.81	2.00e-110	392.00
IUUC-Ppe-101179	Prunus persica	83.85	0.00e+00	638.00
IUUC-Sit-109966	Setaria italica	62.54	2.00e-110	392.00
IUUC-Stu-112315	Solanum tuberosum	81.47	5.00e-160	556.00
IUUC-Sbi-114323	Sorghum bicolor	57.61	2.00e-103	368.00
IUUC-Tca-121448	Theobroma cacao	84.97	0.00e+00	630.00
IUUC-Tae-123437	Triticum aestivum	56.10	1.00e-107	382.00
IUUC-Vvi-131470	Vitis vinifera	80.17	2.00e-172	597.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence