iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121448

Ensembl Protein ID

EOY17600

UniProt Accession

A0A061FJT3; A0A061FJT3_THECC

Genbank Protein ID

EOY17600.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001888

Gene Name

TCM_042389

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_042389	EOY17600	EOY17600

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-20	72.2	184	219

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    HtdsvtclafsdtllvsGsdDgtikvWDlrtgvllk 37
           H+ds++cl   d+l+ sGs+D+t+kvW++++ ++l 
   Q: 184  HADSISCLTVYDGLIYSGSWDKTLKVWRISDLKCLE 219
           9*******9537*****************9999986 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAPPMQEAVL STPLLSSATA SSSSISSTSS EADDSPPASH RFELLDVTKY EFPSKTFSGS 60
QTYKSLAVLS GHVGSVSCLA LCGEFILSAS QGKDIIVWQQ PDLRQFTKFG QGDGSVKALV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTATCTCTTT CTCTCAGACA GGAGCGCATA AGATTCAGGA ACGGTTTTTC TTACAATGGC 60
TCCTCCCATG CAAGAAGCTG TCTTGTCAAC TCCCTTATTA TCATCTGCTA CAGCAAGTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002847	Amborella trichopoda	68.62	5.00e-133	466.00
IUUC-Aly-005620	Arabidopsis lyrata	75.07	1.00e-147	515.00
IUUC-Ath-006729	Arabidopsis thaliana	74.51	5.00e-148	516.00
IUUC-Bdi-014229	Brachypodium distachyon	56.97	1.00e-104	372.00
IUUC-Bol-015324	Brassica oleracea	75.41	8.00e-146	509.00
IUUC-Bra-017033	Brassica rapa	74.59	1.00e-149	521.00
IUUC-Gma-043773	Glycine max	84.19	2.00e-163	567.00
IUUC-Hvu-047162	Hordeum vulgare	57.45	3.00e-80	290.00
IUUC-Lpe-050845	Leersia perrieri	58.14	5.00e-95	340.00
IUUC-Mtr-058525	Medicago truncatula	79.67	7.00e-157	545.00
IUUC-Mac-064928	Musa acuminata	65.80	9.00e-113	399.00
IUUC-Oba-075989	Oryza barthii	61.43	2.00e-117	414.00
IUUC-Obr-076522	Oryza brachyantha	61.02	7.00e-118	416.00
IUUC-Ogl-077747	Oryza glaberrima	60.28	4.00e-116	410.00
IUUC-Ogu-078306	Oryza glumaepatula	61.27	4.00e-115	407.00
IUUC-Oin-079397	Oryza indica	60.98	2.00e-114	405.00
IUUC-Olo-080627	Oryza longistaminata	62.08	4.00e-78	283.00
IUUC-Ome-081295	Oryza meridionalis	60.40	1.00e-113	402.00
IUUC-Oni-082259	Oryza nivara	60.28	4.00e-116	410.00
IUUC-Opu-083686	Oryza punctata	62.10	2.00e-116	411.00
IUUC-Oru-084598	Oryza rufipogon	60.98	2.00e-114	405.00
IUUC-Osa-085705	Oryza sativa	60.28	9.00e-112	396.00
IUUC-Pop-099519	Populus trichocarpa	84.37	0.00e+00	633.00
IUUC-Ppe-101179	Prunus persica	82.28	0.00e+00	625.00
IUUC-Sit-109966	Setaria italica	62.16	3.00e-113	401.00
IUUC-Sly-111222	Solanum lycopersicum	76.22	5.00e-147	513.00
IUUC-Stu-112315	Solanum tuberosum	80.17	5.00e-159	553.00
IUUC-Sbi-114323	Sorghum bicolor	55.25	5.00e-108	383.00
IUUC-Tae-123485	Triticum aestivum	58.26	3.00e-110	391.00
IUUC-Vvi-131470	Vitis vinifera	81.42	4.00e-171	593.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence